Model info
| Transcription factor | E2f3 | ||||||||
| Model | E2F3_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 10 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dSGCGGGARv | ||||||||
| Best auROC (human) | 0.813 | ||||||||
| Best auROC (mouse) | 0.971 | ||||||||
| Peak sets in benchmark (human) | 3 | ||||||||
| Peak sets in benchmark (mouse) | 22 | ||||||||
| Aligned words | 498 | ||||||||
| TF family | E2F-related factors {3.3.2} | ||||||||
| TF subfamily | E2F {3.3.2.1} | ||||||||
| MGI | MGI:1096340 | ||||||||
| EntrezGene | GeneID:13557 (SSTAR profile) | ||||||||
| UniProt ID | E2F3_MOUSE | ||||||||
| UniProt AC | O35261 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | E2f3 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 93.0 | 56.0 | 284.0 | 65.0 |
| 02 | 61.0 | 128.0 | 308.0 | 1.0 |
| 03 | 3.0 | 12.0 | 475.0 | 8.0 |
| 04 | 37.0 | 457.0 | 0.0 | 4.0 |
| 05 | 10.0 | 15.0 | 471.0 | 2.0 |
| 06 | 2.0 | 13.0 | 479.0 | 4.0 |
| 07 | 33.0 | 5.0 | 459.0 | 1.0 |
| 08 | 490.0 | 2.0 | 4.0 | 2.0 |
| 09 | 220.0 | 42.0 | 235.0 | 1.0 |
| 10 | 104.0 | 131.0 | 235.0 | 28.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.288 | -0.784 | 0.818 | -0.639 |
| 02 | -0.701 | 0.027 | 0.898 | -3.9 |
| 03 | -3.321 | -2.23 | 1.33 | -2.58 |
| 04 | -1.185 | 1.291 | -4.397 | -3.122 |
| 05 | -2.39 | -2.03 | 1.321 | -3.569 |
| 06 | -3.569 | -2.159 | 1.338 | -3.122 |
| 07 | -1.294 | -2.957 | 1.296 | -3.9 |
| 08 | 1.361 | -3.569 | -3.122 | -3.569 |
| 09 | 0.564 | -1.063 | 0.629 | -3.9 |
| 10 | -0.177 | 0.05 | 0.629 | -1.451 |