Model info
Transcription factorE4f1
ModelE4F1_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length9
Quality
D
Motif rank
0
ConsensusnGTGACGTM
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words9
TF familyFactors with multiple dispersed zinc fingers{2.3.4}
TF subfamilyunclassified{2.3.4.0}
MGI109530
EntrezGene13560
UniProt IDE4F1_MOUSE
UniProt ACQ8CCE9
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.9591
0.0005 4.31981
0.0001 5.47851
GTEx tissue expression atlas E4f1 expression
ReMap ChIP-seq dataset list E4f1 datasets
Motifs in JASPAR
PCM
ACGT
011.523.8311.522.128
020.6080.07.2971.095
030.00.00.09.0
040.00.04.7434.257
059.00.00.00.0
060.09.00.00.0
070.00.09.00.0
081.2160.00.07.784
091.6725.1991.0641.064
PWM
ACGT
01-0.3020.448-0.302-0.044
02-0.883-1.6281.031-0.532
03-1.628-1.628-1.6281.227
04-1.628-1.6280.6370.541
051.227-1.628-1.628-1.628
06-1.6281.227-1.628-1.628
07-1.628-1.6281.227-1.628
08-0.461-1.628-1.6281.091
09-0.2310.72-0.551-0.551