Model info
Transcription factorE4f1
ModelE4F1_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length9
Quality
D
Motif rank
0
ConsensusnGTGACGTM
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words9
TF familyFactors with multiple dispersed zinc fingers{2.3.4}
TF subfamilyunclassified{2.3.4.0}
MGI109530
EntrezGene13560
UniProt IDE4F1_MOUSE
UniProt ACQ8CCE9
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.9591
0.0005 4.31981
0.0001 5.47851
GTEx tissue expression atlas E4f1 expression
Motifs in JASPAR
PCM
ACGT
011.523.8311.522.128
020.6080.07.2971.095
030.00.00.09.0
040.00.04.7434.257
059.00.00.00.0
060.09.00.00.0
070.00.09.00.0
081.2160.00.07.784
091.6725.1991.0641.064
PWM
ACGT
01-0.3020.448-0.302-0.044
02-0.883-1.6281.031-0.532
03-1.628-1.628-1.6281.227
04-1.628-1.6280.6370.541
051.227-1.628-1.628-1.628
06-1.6281.227-1.628-1.628
07-1.628-1.6281.227-1.628
08-0.461-1.628-1.6281.091
09-0.2310.72-0.551-0.551