Model info
Transcription factorEGR1
ModelEGR1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
0
ConsensusvnvdGhGKGGGYGKndv
Best auROC (human)0.9888154066660373
Best auROC (mouse)0.9811818654962672
Peak sets in benchmark (human)36
Peak sets in benchmark (mouse)12
Aligned words500
TF familyThree-zinc finger Kr├╝ppel-related factors{2.3.1}
TF subfamilyEGR factors{2.3.1.3}
HGNC3238
EntrezGene1958
UniProt IDEGR1_HUMAN
UniProt ACP18146
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.69661
0.0005 4.59371
0.0001 6.42631
PCM
ACGT
01116.0124.0205.055.0
02160.064.0159.0117.0
03139.090.0230.041.0
04118.056.0177.0149.0
0556.015.0404.025.0
06118.0253.023.0106.0
0728.017.0435.020.0
0816.02.0205.0277.0
0946.01.0446.07.0
108.02.0479.011.0
1112.016.0465.07.0
12110.0238.02.0150.0
1344.05.0421.030.0
1455.011.0348.086.0
15169.064.0203.064.0
16156.041.0228.075.0
17132.091.0218.059.0
PWM
ACGT
01-0.074-0.0080.49-0.805
020.244-0.6580.238-0.065
030.105-0.3240.604-1.09
04-0.057-0.7880.3440.174
05-0.788-2.0341.165-1.561
06-0.0570.699-1.64-0.163
07-1.454-1.921.238-1.77
08-1.975-3.5730.490.789
09-0.979-3.9031.263-2.694
10-2.584-3.5731.334-2.311
11-2.234-1.9751.305-2.694
12-0.1260.638-3.5730.18
13-1.022-2.9611.206-1.389
14-0.805-2.3111.016-0.368
150.298-0.6580.48-0.658
160.219-1.090.595-0.503
170.054-0.3130.551-0.737