Model info
Transcription factorEGR2
ModelEGR2_HUMAN.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
1
ConsensusdvdGhGKGGGhGKddv
Best auROC (human)0.9877415529929839
Best auROC (mouse)0.98025478169583
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)25
Aligned words505
TF familyThree-zinc finger Kr├╝ppel-related factors{2.3.1}
TF subfamilyEGR factors{2.3.1.3}
HGNC3239
EntrezGene1959
UniProt IDEGR2_HUMAN
UniProt ACP11161
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.33211
0.0005 4.33331
0.0001 6.39621
GTEx tissue expression atlas EGR2 expression
ReMap ChIP-seq dataset list EGR2 datasets
Motifs in JASPAR
PCM
ACGT
0197.072.0228.0101.0
02140.086.0226.046.0
0394.050.0186.0168.0
0431.033.0423.011.0
05122.0182.029.0165.0
063.09.0483.03.0
076.05.0173.0314.0
0881.02.0405.010.0
0912.05.0460.021.0
1012.09.0475.02.0
11160.0178.06.0154.0
1216.03.0454.025.0
1334.014.0355.095.0
14149.047.0229.073.0
15110.040.0261.087.0
1694.082.0257.065.0
PWM
ACGT
01-0.246-0.5390.599-0.206
020.116-0.3640.591-0.975
03-0.277-0.8940.3970.296
04-1.354-1.2941.214-2.307
05-0.020.376-1.4170.279
06-3.321-2.481.347-3.321
07-2.815-2.9570.3260.918
08-0.423-3.5691.171-2.39
09-2.23-2.9571.298-1.721
10-2.23-2.481.33-3.569
110.2480.354-2.8150.21
12-1.971-3.3211.285-1.558
13-1.266-2.0921.04-0.267
140.178-0.9540.604-0.525
15-0.122-1.110.734-0.353
16-0.277-0.4110.718-0.639