Model info
Transcription factorEgr2
ModelEGR2_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length21
Quality
A
Motif rank
0
ConsensusvdvdRhGKGGGhGKvddnndv
Best auROC (human)0.9610952868672548
Best auROC (mouse)0.9959901415408094
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)25
Aligned words575
TF familyThree-zinc finger Kr├╝ppel-related factors{2.3.1}
TF subfamilyEGR factors{2.3.1.3}
MGI95296
EntrezGene13654
UniProt IDEGR2_MOUSE
UniProt ACP08152
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.15881
0.0005 8.19461
0.0001 12.41351
GTEx tissue expression atlas Egr2 expression
ReMap ChIP-seq dataset list Egr2 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0121.08.037.021.032.016.029.019.050.035.076.054.05.06.046.024.0
0218.017.063.010.027.016.018.04.041.033.097.017.09.016.074.019.0
0312.09.053.021.016.010.011.045.041.031.087.093.07.04.018.021.0
0413.07.050.06.010.05.037.02.031.013.0118.07.017.019.0141.03.0
0533.014.06.018.04.016.02.022.082.0137.09.0118.02.06.06.04.0
067.03.0102.09.06.01.0165.01.00.00.023.00.01.01.0159.01.0
070.01.011.02.00.00.01.04.05.06.0151.0287.03.01.06.01.0
082.01.03.02.00.00.08.00.012.00.0154.03.012.00.0278.04.0
090.00.024.02.01.00.00.00.02.03.0417.021.00.00.09.00.0
100.00.03.00.00.02.01.00.07.03.0440.00.02.00.021.00.0
113.00.00.06.01.00.00.04.0105.0194.04.0162.00.00.00.00.0
125.04.095.05.09.05.0170.010.00.01.02.01.01.04.0163.04.0
130.00.010.05.03.01.04.06.029.013.0278.0110.04.02.011.03.0
148.06.017.05.04.03.06.03.091.039.0147.026.013.016.073.022.0
1528.06.070.012.018.014.012.020.031.024.0132.056.06.012.022.016.0
1612.08.049.014.014.07.025.010.041.033.0133.029.08.012.069.015.0
1718.09.033.015.015.018.010.017.074.049.080.073.011.010.035.012.0
1821.018.068.011.014.016.039.017.036.018.087.017.09.014.073.021.0
1918.06.045.011.09.015.018.024.040.037.0139.051.08.09.035.014.0
2016.011.030.018.011.019.028.09.055.057.092.033.06.020.054.020.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.349-1.2850.209-0.3490.066-0.616-0.031-0.4470.5080.1540.9240.584-1.728-1.5580.425-0.218
02-0.5-0.5560.737-1.071-0.102-0.616-0.5-1.9340.3110.0961.167-0.556-1.173-0.6160.897-0.447
03-0.895-1.1730.566-0.349-0.616-1.071-0.980.4030.3110.0341.0581.125-1.412-1.934-0.5-0.349
04-0.818-1.4120.508-1.558-1.071-1.7280.209-2.5420.034-0.8181.362-1.412-0.556-0.4471.54-2.192
050.096-0.746-1.558-0.5-1.934-0.616-2.542-0.3030.9991.511-1.1731.362-2.542-1.558-1.558-1.934
06-1.412-2.1921.217-1.173-1.558-3.0861.696-3.086-4.365-4.365-0.26-4.365-3.086-3.0861.659-3.086
07-4.365-3.086-0.98-2.542-4.365-4.365-3.086-1.934-1.728-1.5581.6082.249-2.192-3.086-1.558-3.086
08-2.542-3.086-2.192-2.542-4.365-4.365-1.285-4.365-0.895-4.3651.628-2.192-0.895-4.3652.217-1.934
09-4.365-4.365-0.218-2.542-3.086-4.365-4.365-4.365-2.542-2.1922.622-0.349-4.365-4.365-1.173-4.365
10-4.365-4.365-2.192-4.365-4.365-2.542-3.086-4.365-1.412-2.1922.676-4.365-2.542-4.365-0.349-4.365
11-2.192-4.365-4.365-1.558-3.086-4.365-4.365-1.9341.2461.858-1.9341.678-4.365-4.365-4.365-4.365
12-1.728-1.9341.146-1.728-1.173-1.7281.726-1.071-4.365-3.086-2.542-3.086-3.086-1.9341.684-1.934
13-4.365-4.365-1.071-1.728-2.192-3.086-1.934-1.558-0.031-0.8182.2171.292-1.934-2.542-0.98-2.192
14-1.285-1.558-0.556-1.728-1.934-2.192-1.558-2.1921.1030.2611.581-0.139-0.818-0.6160.884-0.303
15-0.066-1.5580.842-0.895-0.5-0.746-0.895-0.3970.034-0.2181.4740.62-1.558-0.895-0.303-0.616
16-0.895-1.2850.488-0.746-0.746-1.412-0.178-1.0710.3110.0961.481-0.031-1.285-0.8950.828-0.678
17-0.5-1.1730.096-0.678-0.678-0.5-1.071-0.5560.8970.4880.9750.884-0.98-1.0710.154-0.895
18-0.349-0.50.813-0.98-0.746-0.6160.261-0.5560.182-0.51.058-0.556-1.173-0.7460.884-0.349
19-0.5-1.5580.403-0.98-1.173-0.678-0.5-0.2180.2870.2091.5250.527-1.285-1.1730.154-0.746
20-0.616-0.980.002-0.5-0.98-0.447-0.066-1.1730.6020.6381.1140.096-1.558-0.3970.584-0.397