Model info
Transcription factorEgr2
ModelEGR2_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensusbShGKGGGhGKddv
Best auROC (human)0.9478577106932946
Best auROC (mouse)0.9953579154874458
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)25
Aligned words506
TF familyThree-zinc finger Kr├╝ppel-related factors{2.3.1}
TF subfamilyEGR factors{2.3.1.3}
MGI95296
EntrezGene13654
UniProt IDEGR2_MOUSE
UniProt ACP08152
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.24691
0.0005 4.29471
0.0001 6.42881
GTEx tissue expression atlas Egr2 expression
ReMap ChIP-seq dataset list Egr2 datasets
Motifs in JASPAR
PCM
ACGT
0169.071.0209.0151.0
0247.067.0364.022.0
03111.0199.034.0156.0
0410.06.0475.09.0
054.07.0148.0341.0
0631.02.0463.04.0
071.02.0492.05.0
081.09.0490.00.0
09124.0209.07.0160.0
1014.08.0462.016.0
1136.04.0365.095.0
12126.048.0271.055.0
1394.054.0264.088.0
14112.085.0250.053.0
PWM
ACGT
01-0.584-0.5560.5090.187
02-0.958-0.6131.061-1.681
03-0.1170.46-1.270.219
04-2.394-2.8191.326-2.484
05-3.126-2.6940.1670.996
06-1.358-3.5731.3-3.126
07-3.903-3.5731.361-2.961
08-3.903-2.4841.357-4.4
09-0.0080.509-2.6940.244
10-2.096-2.5841.298-1.975
11-1.215-3.1261.063-0.271
120.008-0.9380.767-0.805
13-0.281-0.8230.741-0.346
14-0.108-0.380.687-0.841