Model info
Transcription factorEgr2
ModelEGR2_MOUSE.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
A
Motif rank
1
ConsensusvdGhGKGGGhGKvdvddd
Best auROC (human)0.942
Best auROC (mouse)0.993
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)25
Aligned words508
TF familyThree-zinc finger Kr├╝ppel-related factors {2.3.1}
TF subfamilyEGR factors {2.3.1.3}
MGIMGI:95296
EntrezGeneGeneID:13654
(SSTAR profile)
UniProt IDEGR2_MOUSE
UniProt ACP08152
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.84821
0.0005 4.77861
0.0001 6.727110000000001
GTEx tissue expression atlas Egr2 expression
Motifs in JASPAR
PCM
ACGT
01178.074.0205.042.0
0295.039.0229.0136.0
0342.029.0412.016.0
04155.0178.021.0145.0
0521.022.0441.015.0
0617.011.0203.0268.0
0779.02.0394.024.0
0815.03.0453.028.0
0915.07.0475.02.0
10222.0132.07.0138.0
1124.01.0449.025.0
1231.019.0365.084.0
13159.067.0215.058.0
14144.028.0239.088.0
1596.067.0282.054.0
16133.063.0199.0104.0
1787.052.0293.067.0
18100.064.0265.070.0
PWM
ACGT
010.352-0.5140.492-1.065
02-0.269-1.1360.6020.085
03-1.065-1.4191.186-1.973
040.2150.352-1.7230.149
05-1.723-1.6791.254-2.032
06-1.918-2.3090.4820.758
07-0.45-3.5711.142-1.598
08-2.032-3.3231.281-1.452
09-2.032-2.6921.328-3.571
100.5710.056-2.6920.1
11-1.598-3.9011.272-1.56
12-1.356-1.8161.065-0.39
130.24-0.6110.539-0.752
140.142-1.4520.644-0.344
15-0.258-0.6110.809-0.821
160.063-0.6710.462-0.179
17-0.355-0.8580.847-0.611
18-0.218-0.6560.747-0.568