Model info
Transcription factorEGR4
ModelEGR4_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length11
Quality
D
Motif rank
0
ConsensusGGSGGYAGGGM
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words6
TF familyThree-zinc finger Kr├╝ppel-related factors{2.3.1}
TF subfamilyEGR factors{2.3.1.3}
HGNC3241
EntrezGene1961
UniProt IDEGR4_HUMAN
UniProt ACQ05215
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.95131
0.0005 4.65579
0.0001 6.28625
GTEx tissue expression atlas EGR4 expression
ReMap ChIP-seq dataset list EGR4 datasets
Motifs in JASPAR
PCM
ACGT
010.1260.1265.6230.126
020.00.06.00.0
030.03.0822.0120.906
040.00.06.00.0
050.00.06.00.0
060.03.5850.5031.912
073.4850.02.5150.0
080.00.05.0940.906
090.00.5035.4970.0
100.00.06.00.0
111.613.1830.6040.604
PWM
ACGT
01-1.222-1.2221.137-1.222
02-1.47-1.471.197-1.47
03-1.470.5950.233-0.364
04-1.47-1.471.197-1.47
05-1.47-1.471.197-1.47
06-1.470.728-0.7170.192
070.703-1.470.42-1.47
08-1.47-1.471.046-0.364
09-1.47-0.7171.116-1.47
10-1.47-1.471.197-1.47
110.0550.623-0.616-0.616