Model info
Transcription factorEgr4
ModelEGR4_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length11
Quality
D
Motif rank
0
ConsensusGGSGGYAGGGM
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words6
TF familyThree-zinc finger Kr├╝ppel-related factors{2.3.1}
TF subfamilyEGR factors{2.3.1.3}
MGI99252
EntrezGene13656
UniProt IDEGR4_MOUSE
UniProt ACQ9WUF2
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.94496
0.0005 4.63401
0.0001 6.26159
GTEx tissue expression atlas Egr4 expression
Motifs in JASPAR
PCM
ACGT
010.1260.1265.6230.126
020.00.06.00.0
030.03.0822.0120.906
040.00.06.00.0
050.00.06.00.0
060.03.5850.5031.912
073.4850.02.5150.0
080.00.05.0940.906
090.00.5035.4970.0
100.00.06.00.0
111.613.1830.6040.604
PWM
ACGT
01-1.222-1.2221.137-1.222
02-1.47-1.471.197-1.47
03-1.470.5950.233-0.364
04-1.47-1.471.197-1.47
05-1.47-1.471.197-1.47
06-1.470.728-0.7170.192
070.703-1.470.42-1.47
08-1.47-1.471.046-0.364
09-1.47-0.7171.116-1.47
10-1.47-1.471.197-1.47
110.0550.623-0.616-0.616