Model info
Transcription factorElk1
ModelELK1_MOUSE.H11DI.0.B
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
B
Motif rank
0
ConsensusnvSCGGAAGYvv
Best auROC (human)0.9847786376601896
Best auROC (mouse)0.7063267100858827
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)7
Aligned words511
TF familyEts-related factors{3.5.2}
TF subfamilyElk-like factors{3.5.2.2}
MGI101833
EntrezGene13712
UniProt IDELK1_MOUSE
UniProt ACP41969
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.38994
0.0005 8.74851
0.0001 13.00309
GTEx tissue expression atlas Elk1 expression
ReMap ChIP-seq dataset list Elk1 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0179.017.023.06.048.018.047.013.099.019.051.010.023.022.07.018.0
0245.0154.048.02.04.071.01.00.04.093.029.02.01.044.02.00.0
0315.026.00.013.041.0317.02.02.017.061.00.02.02.02.00.00.0
040.00.075.00.00.00.0406.00.00.00.01.01.00.00.017.00.0
050.00.00.00.00.00.00.00.00.00.0498.01.00.00.01.00.0
060.00.00.00.00.00.00.00.0496.01.00.02.01.00.00.00.0
07491.00.01.05.01.00.00.00.00.00.00.00.01.00.00.01.0
0846.020.0399.028.00.00.00.00.00.00.01.00.02.00.04.00.0
091.08.00.039.01.04.00.015.019.064.011.0310.00.012.00.016.0
107.01.012.01.017.010.052.09.06.01.01.03.050.055.0225.050.0
1126.016.032.06.011.029.016.011.092.066.0106.026.014.012.028.09.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.92-0.599-0.302-1.60.425-0.5430.404-0.861.145-0.490.485-1.114-0.302-0.346-1.454-0.543
020.3611.5850.425-2.584-1.9750.814-3.126-4.4-1.9751.082-0.074-2.584-3.1260.339-2.584-4.4
03-0.721-0.181-4.4-0.860.2692.306-2.584-2.584-0.5990.663-4.4-2.584-2.584-2.584-4.4-4.4
04-4.4-4.40.868-4.4-4.4-4.42.553-4.4-4.4-4.4-3.126-3.126-4.4-4.4-0.599-4.4
05-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.42.757-3.126-4.4-4.4-3.126-4.4
06-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.42.753-3.126-4.4-2.584-3.126-4.4-4.4-4.4
072.743-4.4-3.126-1.77-3.126-4.4-4.4-4.4-4.4-4.4-4.4-4.4-3.126-4.4-4.4-3.126
080.383-0.4392.536-0.108-4.4-4.4-4.4-4.4-4.4-4.4-3.126-4.4-2.584-4.4-1.975-4.4
09-3.126-1.328-4.40.219-3.126-1.975-4.4-0.721-0.490.711-1.0222.283-4.4-0.938-4.4-0.658
10-1.454-3.126-0.938-3.126-0.599-1.1140.504-1.215-1.6-3.126-3.126-2.2340.4650.561.9630.465
11-0.181-0.6580.023-1.6-1.022-0.074-0.658-1.0221.0720.7411.213-0.181-0.788-0.938-0.108-1.215