Model info
Transcription factorElk4
ModelELK4_MOUSE.H11DI.0.B
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
B
Motif rank
0
ConsensusvvMCGGAARYvvvnnb
Best auROC (human)0.9655748820958392
Best auROC (mouse)0.6323030813202826
Peak sets in benchmark (human)13
Peak sets in benchmark (mouse)4
Aligned words190
TF familyEts-related factors{3.5.2}
TF subfamilyElk-like factors{3.5.2.2}
MGI102853
EntrezGene13714
UniProt IDELK4_MOUSE
UniProt ACP41158
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.75321
0.0005 8.59041
0.0001 12.12531
GTEx tissue expression atlas Elk4 expression
ReMap ChIP-seq dataset list Elk4 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0118.05.012.01.08.020.017.06.030.09.033.05.09.05.06.05.0
0213.042.08.02.01.036.02.00.05.051.07.05.00.017.00.00.0
039.07.00.03.015.0127.02.02.00.016.00.01.03.04.00.00.0
040.00.024.03.01.01.0149.03.00.00.02.00.00.00.06.00.0
050.00.01.00.00.00.01.00.00.01.0180.00.00.00.06.00.0
060.00.00.00.01.00.00.00.0184.00.04.00.00.00.00.00.0
07182.00.00.03.00.00.00.00.04.00.00.00.00.00.00.00.0
0842.03.0133.08.00.00.00.00.00.00.00.00.00.00.03.00.0
098.014.02.018.00.02.00.01.03.046.010.077.00.03.04.01.0
101.03.06.01.08.014.037.06.02.02.010.02.017.017.056.07.0
117.07.011.03.02.017.09.08.027.024.052.06.02.02.010.02.0
1210.011.016.01.07.018.012.013.013.025.038.06.01.09.08.01.0
1310.03.07.011.05.015.025.018.013.033.018.010.02.03.011.05.0
1416.00.012.02.09.015.019.011.012.022.013.014.09.04.010.021.0
1512.02.024.08.06.013.09.013.05.014.019.016.05.06.024.013.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.412-0.8240.015-2.213-0.3770.5150.356-0.6520.916-0.2641.01-0.824-0.264-0.824-0.652-0.824
020.0931.249-0.377-1.652-2.2131.096-1.652-3.612-0.8241.442-0.505-0.824-3.6120.356-3.612-3.612
03-0.264-0.505-3.612-1.2940.2332.35-1.652-1.652-3.6120.296-3.612-2.213-1.294-1.031-3.612-3.612
04-3.612-3.6120.695-1.294-2.213-2.2132.51-1.294-3.612-3.612-1.652-3.612-3.612-3.612-0.652-3.612
05-3.612-3.612-2.213-3.612-3.612-3.612-2.213-3.612-3.612-2.2132.698-3.612-3.612-3.612-0.652-3.612
06-3.612-3.612-3.612-3.612-2.213-3.612-3.612-3.6122.72-3.612-1.031-3.612-3.612-3.612-3.612-3.612
072.709-3.612-3.612-1.294-3.612-3.612-3.612-3.612-1.031-3.612-3.612-3.612-3.612-3.612-3.612-3.612
081.249-1.2942.396-0.377-3.612-3.612-3.612-3.612-3.612-3.612-3.612-3.612-3.612-3.612-1.294-3.612
09-0.3770.166-1.6520.412-3.612-1.652-3.612-2.213-1.2941.339-0.1621.852-3.612-1.294-1.031-2.213
10-2.213-1.294-0.652-2.213-0.3770.1661.123-0.652-1.652-1.652-0.162-1.6520.3560.3561.535-0.505
11-0.505-0.505-0.069-1.294-1.6520.356-0.264-0.3770.8110.6951.461-0.652-1.652-1.652-0.162-1.652
12-0.162-0.0690.296-2.213-0.5050.4120.0150.0930.0930.7351.15-0.652-2.213-0.264-0.377-2.213
13-0.162-1.294-0.505-0.069-0.8240.2330.7350.4120.0931.010.412-0.162-1.652-1.294-0.069-0.824
140.296-3.6120.015-1.652-0.2640.2330.465-0.0690.0150.6090.0930.166-0.264-1.031-0.1620.563
150.015-1.6520.695-0.377-0.6520.093-0.2640.093-0.8240.1660.4650.296-0.824-0.6520.6950.093