Model info
Transcription factorElk4
ModelELK4_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
B
Motif rank
0
ConsensusvvvSMGGAARbvv
Best auROC (human)0.9548440392647368
Best auROC (mouse)0.6466602765860937
Peak sets in benchmark (human)13
Peak sets in benchmark (mouse)4
Aligned words175
TF familyEts-related factors{3.5.2}
TF subfamilyElk-like factors{3.5.2.2}
MGI102853
EntrezGene13714
UniProt IDELK4_MOUSE
UniProt ACP41158
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.33111
0.0005 5.15006
0.0001 6.76939
GTEx tissue expression atlas Elk4 expression
Motifs in JASPAR
PCM
ACGT
0136.045.076.018.0
0260.029.077.09.0
0376.017.076.06.0
0431.098.039.07.0
0544.0114.08.09.0
063.00.0171.01.0
076.01.0167.01.0
08165.06.04.00.0
09170.00.03.02.0
1040.04.0124.07.0
1116.072.019.068.0
1252.020.092.011.0
1332.036.080.027.0
PWM
ACGT
01-0.1890.0270.54-0.848
020.308-0.3970.553-1.476
030.54-0.9010.54-1.821
04-0.3330.79-0.111-1.692
050.0060.94-1.579-1.476
06-2.351-3.5521.342-2.979
07-1.821-2.9791.318-2.979
081.306-1.821-2.142-3.552
091.336-3.552-2.351-2.616
10-0.087-2.1421.023-1.692
11-0.9570.487-0.7970.431
120.168-0.7490.728-1.299
13-0.302-0.1890.59-0.465