Model info
Transcription factorElk4
ModelELK4_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
B
Motif rank
0
ConsensusvvvSMGGAARbvv
Best auROC (human)0.9548440392647368
Best auROC (mouse)0.6466602765860937
Peak sets in benchmark (human)13
Peak sets in benchmark (mouse)4
Aligned words175
TF familyEts-related factors{3.5.2}
TF subfamilyElk-like factors{3.5.2.2}
MGI102853
EntrezGene13714
UniProt IDELK4_MOUSE
UniProt ACP41158
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.32601
0.0005 5.15391
0.0001 6.76971
GTEx tissue expression atlas Elk4 expression
ReMap ChIP-seq dataset list Elk4 datasets
Motifs in JASPAR
PCM
ACGT
0136.045.076.018.0
0260.029.077.09.0
0376.017.076.06.0
0431.098.039.07.0
0544.0114.08.09.0
063.00.0171.01.0
076.01.0167.01.0
08165.06.04.00.0
09170.00.03.02.0
1040.04.0124.07.0
1116.072.019.068.0
1252.020.092.011.0
1332.036.080.027.0
PWM
ACGT
01-0.1890.0270.54-0.848
020.308-0.3970.553-1.476
030.54-0.9010.54-1.821
04-0.3330.79-0.111-1.692
050.0060.94-1.579-1.476
06-2.351-3.5521.342-2.979
07-1.821-2.9791.318-2.979
081.306-1.821-2.142-3.552
091.336-3.552-2.351-2.616
10-0.087-2.1421.023-1.692
11-0.9570.487-0.7970.431
120.168-0.7490.728-1.299
13-0.302-0.1890.59-0.465