Model info
Transcription factorEsrra
ModelERR1_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusddnYCAAGGTCA
Best auROC (human)0.9499381265797402
Best auROC (mouse)0.9821854306851471
Peak sets in benchmark (human)31
Peak sets in benchmark (mouse)3
Aligned words500
TF familySteroid hormone receptors (NR3){2.1.1}
TF subfamilyER-like receptors (NR3A&B){2.1.1.2}
MGI1346831
EntrezGene26379
UniProt IDERR1_MOUSE
UniProt ACO08580
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.2717099999999997
0.0005 4.666625
0.0001 7.293845000000001
GTEx tissue expression atlas Esrra expression
Motifs in JASPAR
PCM
ACGT
01200.089.093.0118.0
0281.063.0245.0111.0
0339.0153.0155.0153.0
0412.0132.038.0318.0
0531.0408.060.01.0
06470.03.027.00.0
07497.00.03.00.0
080.00.0496.04.0
090.00.0498.02.0
106.03.023.0468.0
110.0475.010.015.0
12495.00.05.00.0
PWM
ACGT
010.465-0.335-0.291-0.057
02-0.427-0.6730.667-0.117
03-1.1380.20.2130.2
04-2.2340.054-1.1630.926
05-1.3581.174-0.721-3.903
061.315-3.325-1.489-4.4
071.371-4.4-3.325-4.4
08-4.4-4.41.369-3.126
09-4.4-4.41.373-3.573
10-2.819-3.325-1.641.311
11-4.41.326-2.394-2.034
121.367-4.4-2.961-4.4