Model info
Transcription factorEsr1
ModelESR1_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusRKGWCASCvTGhYCY
Best auROC (human)0.9656938344809058
Best auROC (mouse)0.992827764183282
Peak sets in benchmark (human)432
Peak sets in benchmark (mouse)58
Aligned words500
TF familySteroid hormone receptors (NR3){2.1.1}
TF subfamilyER-like receptors (NR3A&B){2.1.1.2}
MGI1352467
EntrezGene13982
UniProt IDESR1_MOUSE
UniProt ACP19785
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.23481
0.0005 5.24601
0.0001 7.31361
GTEx tissue expression atlas Esr1 expression
Motifs in JASPAR
PCM
ACGT
01279.023.0153.045.0
0247.03.0384.066.0
0349.036.0402.013.0
04121.035.054.0290.0
051.0425.059.015.0
06464.03.023.010.0
0737.0281.0141.041.0
08219.0281.00.00.0
0984.0238.0123.055.0
1038.026.07.0429.0
1113.014.0469.04.0
12275.079.037.0109.0
1333.0397.022.048.0
1452.0409.00.039.0
1535.0188.027.0250.0
PWM
ACGT
010.796-1.640.2-1.0
02-0.958-3.3251.114-0.628
03-0.918-1.2151.16-2.163
04-0.032-1.242-0.8230.835
05-3.9031.215-0.737-2.034
061.303-3.325-1.64-2.394
07-1.1890.8030.119-1.09
080.5550.803-4.4-4.4
09-0.3920.638-0.016-0.805
10-1.163-1.525-2.6941.224
11-2.163-2.0961.313-3.126
120.782-0.452-1.189-0.135
13-1.2981.147-1.681-0.938
14-0.861.177-4.4-1.138
15-1.2420.404-1.4890.687