Model info
Transcription factorEsr1
ModelESR1_MOUSE.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
A
Motif rank
1
ConsensushhRGGTCAbv
Best auROC (human)0.9345505138095
Best auROC (mouse)0.9565866271821922
Peak sets in benchmark (human)432
Peak sets in benchmark (mouse)58
Aligned words500
TF familySteroid hormone receptors (NR3){2.1.1}
TF subfamilyER-like receptors (NR3A&B){2.1.1.2}
MGI1352467
EntrezGene13982
UniProt IDESR1_MOUSE
UniProt ACP19785
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.72936
0.0005 5.91225
0.0001 7.79058
GTEx tissue expression atlas Esr1 expression
Motifs in JASPAR
PCM
ACGT
0161.0273.060.0106.0
02175.0163.059.0103.0
03316.08.0174.02.0
043.00.0483.014.0
053.00.0496.01.0
0619.02.051.0428.0
072.0487.010.01.0
08497.01.02.00.0
0934.0222.0185.059.0
10159.0168.0123.050.0
PWM
ACGT
01-0.7050.774-0.721-0.163
020.3330.263-0.737-0.191
030.92-2.5840.327-3.573
04-3.325-4.41.343-2.096
05-3.325-4.41.369-3.903
06-1.818-3.573-0.8791.222
07-3.5731.351-2.394-3.903
081.371-3.903-3.573-4.4
09-1.270.5690.388-0.737
100.2380.293-0.016-0.898