Model info
| Transcription factor | Etv4 | ||||||||
| Model | ETV4_MOUSE.H11MO.0.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 8 | ||||||||
| Quality | B | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vMGGAAGY | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 47 | ||||||||
| TF family | Ets-related factors {3.5.2} | ||||||||
| TF subfamily | Elk-like factors {3.5.2.2} | ||||||||
| MGI | MGI:99423 | ||||||||
| EntrezGene | GeneID:18612 (SSTAR profile) | ||||||||
| UniProt ID | ETV4_MOUSE | ||||||||
| UniProt AC | P28322 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Etv4 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 7.669 | 21.558 | 14.054 | 3.719 |
| 02 | 31.531 | 10.598 | 2.238 | 2.633 |
| 03 | 2.238 | 0.658 | 42.129 | 1.975 |
| 04 | 3.291 | 0.0 | 43.709 | 0.0 |
| 05 | 41.339 | 0.0 | 5.661 | 0.0 |
| 06 | 39.562 | 0.658 | 0.0 | 6.78 |
| 07 | 12.046 | 1.053 | 33.901 | 0.0 |
| 08 | 1.744 | 12.211 | 7.669 | 25.376 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.387 | 0.572 | 0.167 | -0.999 |
| 02 | 0.938 | -0.095 | -1.379 | -1.263 |
| 03 | -1.379 | -2.06 | 1.221 | -1.465 |
| 04 | -1.095 | -2.581 | 1.257 | -2.581 |
| 05 | 1.202 | -2.581 | -0.652 | -2.581 |
| 06 | 1.159 | -2.06 | -2.581 | -0.496 |
| 07 | 0.023 | -1.842 | 1.009 | -2.581 |
| 08 | -1.547 | 0.036 | -0.387 | 0.728 |