Model info
| Transcription factor | Etv5 | ||||||||
| Model | ETV5_MOUSE.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 14 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vddvAGGRARddvv | ||||||||
| Best auROC (human) | 0.867 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 3 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 500 | ||||||||
| TF family | Ets-related factors {3.5.2} | ||||||||
| TF subfamily | Elk-like factors {3.5.2.2} | ||||||||
| MGI | MGI:1096867 | ||||||||
| EntrezGene | GeneID:104156 (SSTAR profile) | ||||||||
| UniProt ID | ETV5_MOUSE | ||||||||
| UniProt AC | Q9CXC9 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Etv5 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 164.0 | 90.0 | 191.0 | 55.0 |
| 02 | 228.0 | 44.0 | 164.0 | 64.0 |
| 03 | 149.0 | 49.0 | 247.0 | 55.0 |
| 04 | 100.0 | 209.0 | 173.0 | 18.0 |
| 05 | 420.0 | 18.0 | 42.0 | 20.0 |
| 06 | 8.0 | 3.0 | 481.0 | 8.0 |
| 07 | 22.0 | 8.0 | 468.0 | 2.0 |
| 08 | 397.0 | 34.0 | 51.0 | 18.0 |
| 09 | 473.0 | 3.0 | 6.0 | 18.0 |
| 10 | 186.0 | 31.0 | 274.0 | 9.0 |
| 11 | 114.0 | 50.0 | 116.0 | 220.0 |
| 12 | 109.0 | 53.0 | 269.0 | 69.0 |
| 13 | 203.0 | 60.0 | 193.0 | 44.0 |
| 14 | 136.0 | 108.0 | 187.0 | 69.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.269 | -0.324 | 0.42 | -0.805 |
| 02 | 0.595 | -1.022 | 0.269 | -0.658 |
| 03 | 0.174 | -0.918 | 0.675 | -0.805 |
| 04 | -0.22 | 0.509 | 0.322 | -1.868 |
| 05 | 1.203 | -1.868 | -1.067 | -1.77 |
| 06 | -2.584 | -3.325 | 1.338 | -2.584 |
| 07 | -1.681 | -2.584 | 1.311 | -3.573 |
| 08 | 1.147 | -1.27 | -0.879 | -1.868 |
| 09 | 1.322 | -3.325 | -2.819 | -1.868 |
| 10 | 0.393 | -1.358 | 0.778 | -2.484 |
| 11 | -0.091 | -0.898 | -0.074 | 0.56 |
| 12 | -0.135 | -0.841 | 0.76 | -0.584 |
| 13 | 0.48 | -0.721 | 0.43 | -1.022 |
| 14 | 0.083 | -0.144 | 0.399 | -0.584 |