Model info
Transcription factorEtv5
ModelETV5_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
D
Motif rank
0
ConsensusvddvAGGRARddvv
Best auROC (human)0.867
Best auROC (mouse)
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)
Aligned words500
TF familyEts-related factors {3.5.2}
TF subfamilyElk-like factors {3.5.2.2}
MGIMGI:1096867
EntrezGeneGeneID:104156
(SSTAR profile)
UniProt IDETV5_MOUSE
UniProt ACQ9CXC9
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.532159999999999
0.0005 6.3362099999999995
0.0001 7.939010000000001
GTEx tissue expression atlas Etv5 expression
Motifs in JASPAR
PCM
ACGT
01164.090.0191.055.0
02228.044.0164.064.0
03149.049.0247.055.0
04100.0209.0173.018.0
05420.018.042.020.0
068.03.0481.08.0
0722.08.0468.02.0
08397.034.051.018.0
09473.03.06.018.0
10186.031.0274.09.0
11114.050.0116.0220.0
12109.053.0269.069.0
13203.060.0193.044.0
14136.0108.0187.069.0
PWM
ACGT
010.269-0.3240.42-0.805
020.595-1.0220.269-0.658
030.174-0.9180.675-0.805
04-0.220.5090.322-1.868
051.203-1.868-1.067-1.77
06-2.584-3.3251.338-2.584
07-1.681-2.5841.311-3.573
081.147-1.27-0.879-1.868
091.322-3.325-2.819-1.868
100.393-1.3580.778-2.484
11-0.091-0.898-0.0740.56
12-0.135-0.8410.76-0.584
130.48-0.7210.43-1.022
140.083-0.1440.399-0.584