Transcription factor | Fli1 | ||||||||
Model | FLI1_MOUSE.H11DI.0.A | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 16 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | vvvSMGGAARbSvvbv | ||||||||
Best auROC (human) | 0.958 | ||||||||
Best auROC (mouse) | 0.969 | ||||||||
Peak sets in benchmark (human) | 50 | ||||||||
Peak sets in benchmark (mouse) | 32 | ||||||||
Aligned words | 499 | ||||||||
TF family | Ets-related factors {3.5.2} | ||||||||
TF subfamily | Ets-like factors {3.5.2.1} | ||||||||
MGI | MGI:95554 | ||||||||
EntrezGene | GeneID:14247 (SSTAR profile) | ||||||||
UniProt ID | FLI1_MOUSE | ||||||||
UniProt AC | P26323 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Fli1 expression | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 28.0 | 18.0 | 57.0 | 2.0 | 35.0 | 30.0 | 52.0 | 19.0 | 77.0 | 54.0 | 65.0 | 13.0 | 7.0 | 6.0 | 26.0 | 10.0 |
02 | 67.0 | 13.0 | 59.0 | 8.0 | 54.0 | 12.0 | 29.0 | 13.0 | 92.0 | 10.0 | 89.0 | 9.0 | 6.0 | 7.0 | 24.0 | 7.0 |
03 | 19.0 | 133.0 | 65.0 | 2.0 | 4.0 | 29.0 | 8.0 | 1.0 | 16.0 | 101.0 | 81.0 | 3.0 | 3.0 | 32.0 | 2.0 | 0.0 |
04 | 11.0 | 27.0 | 3.0 | 1.0 | 94.0 | 191.0 | 9.0 | 1.0 | 54.0 | 90.0 | 10.0 | 2.0 | 2.0 | 4.0 | 0.0 | 0.0 |
05 | 1.0 | 1.0 | 158.0 | 1.0 | 1.0 | 2.0 | 309.0 | 0.0 | 0.0 | 1.0 | 20.0 | 1.0 | 0.0 | 0.0 | 4.0 | 0.0 |
06 | 0.0 | 0.0 | 2.0 | 0.0 | 1.0 | 0.0 | 3.0 | 0.0 | 3.0 | 2.0 | 484.0 | 2.0 | 0.0 | 0.0 | 2.0 | 0.0 |
07 | 3.0 | 1.0 | 0.0 | 0.0 | 2.0 | 0.0 | 0.0 | 0.0 | 481.0 | 0.0 | 6.0 | 4.0 | 2.0 | 0.0 | 0.0 | 0.0 |
08 | 447.0 | 13.0 | 2.0 | 26.0 | 1.0 | 0.0 | 0.0 | 0.0 | 6.0 | 0.0 | 0.0 | 0.0 | 4.0 | 0.0 | 0.0 | 0.0 |
09 | 82.0 | 21.0 | 354.0 | 1.0 | 7.0 | 0.0 | 5.0 | 1.0 | 0.0 | 1.0 | 1.0 | 0.0 | 4.0 | 1.0 | 19.0 | 2.0 |
10 | 6.0 | 36.0 | 12.0 | 39.0 | 1.0 | 4.0 | 0.0 | 18.0 | 16.0 | 121.0 | 48.0 | 194.0 | 0.0 | 0.0 | 0.0 | 4.0 |
11 | 3.0 | 3.0 | 15.0 | 2.0 | 26.0 | 26.0 | 88.0 | 21.0 | 21.0 | 8.0 | 27.0 | 4.0 | 20.0 | 50.0 | 169.0 | 16.0 |
12 | 14.0 | 9.0 | 40.0 | 7.0 | 32.0 | 32.0 | 12.0 | 11.0 | 79.0 | 71.0 | 129.0 | 20.0 | 3.0 | 9.0 | 25.0 | 6.0 |
13 | 18.0 | 38.0 | 63.0 | 9.0 | 31.0 | 31.0 | 41.0 | 18.0 | 41.0 | 76.0 | 67.0 | 22.0 | 5.0 | 9.0 | 24.0 | 6.0 |
14 | 15.0 | 8.0 | 64.0 | 8.0 | 28.0 | 24.0 | 69.0 | 33.0 | 31.0 | 41.0 | 97.0 | 26.0 | 2.0 | 8.0 | 35.0 | 10.0 |
15 | 18.0 | 18.0 | 33.0 | 7.0 | 9.0 | 26.0 | 40.0 | 6.0 | 38.0 | 93.0 | 107.0 | 27.0 | 6.0 | 21.0 | 42.0 | 8.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | -0.106 | -0.541 | 0.597 | -2.582 | 0.114 | -0.038 | 0.506 | -0.488 | 0.896 | 0.544 | 0.728 | -0.858 | -1.452 | -1.598 | -0.179 | -1.112 |
02 | 0.758 | -0.858 | 0.632 | -1.326 | 0.544 | -0.936 | -0.072 | -0.858 | 1.074 | -1.112 | 1.041 | -1.213 | -1.598 | -1.452 | -0.258 | -1.452 |
03 | -0.488 | 1.441 | 0.728 | -2.582 | -1.973 | -0.072 | -1.326 | -3.124 | -0.656 | 1.167 | 0.947 | -2.232 | -2.232 | 0.025 | -2.582 | -4.398 |
04 | -1.02 | -0.142 | -2.232 | -3.124 | 1.095 | 1.802 | -1.213 | -3.124 | 0.544 | 1.052 | -1.112 | -2.582 | -2.582 | -1.973 | -4.398 | -4.398 |
05 | -3.124 | -3.124 | 1.613 | -3.124 | -3.124 | -2.582 | 2.282 | -4.398 | -4.398 | -3.124 | -0.437 | -3.124 | -4.398 | -4.398 | -1.973 | -4.398 |
06 | -4.398 | -4.398 | -2.582 | -4.398 | -3.124 | -4.398 | -2.232 | -4.398 | -2.232 | -2.582 | 2.73 | -2.582 | -4.398 | -4.398 | -2.582 | -4.398 |
07 | -2.232 | -3.124 | -4.398 | -4.398 | -2.582 | -4.398 | -4.398 | -4.398 | 2.724 | -4.398 | -1.598 | -1.973 | -2.582 | -4.398 | -4.398 | -4.398 |
08 | 2.651 | -0.858 | -2.582 | -0.179 | -3.124 | -4.398 | -4.398 | -4.398 | -1.598 | -4.398 | -4.398 | -4.398 | -1.973 | -4.398 | -4.398 | -4.398 |
09 | 0.959 | -0.39 | 2.418 | -3.124 | -1.452 | -4.398 | -1.768 | -3.124 | -4.398 | -3.124 | -3.124 | -4.398 | -1.973 | -3.124 | -0.488 | -2.582 |
10 | -1.598 | 0.142 | -0.936 | 0.221 | -3.124 | -1.973 | -4.398 | -0.541 | -0.656 | 1.347 | 0.427 | 1.817 | -4.398 | -4.398 | -4.398 | -1.973 |
11 | -2.232 | -2.232 | -0.719 | -2.582 | -0.179 | -0.179 | 1.029 | -0.39 | -0.39 | -1.326 | -0.142 | -1.973 | -0.437 | 0.467 | 1.68 | -0.656 |
12 | -0.786 | -1.213 | 0.246 | -1.452 | 0.025 | 0.025 | -0.936 | -1.02 | 0.922 | 0.816 | 1.41 | -0.437 | -2.232 | -1.213 | -0.218 | -1.598 |
13 | -0.541 | 0.195 | 0.697 | -1.213 | -0.006 | -0.006 | 0.271 | -0.541 | 0.271 | 0.883 | 0.758 | -0.344 | -1.768 | -1.213 | -0.258 | -1.598 |
14 | -0.719 | -1.326 | 0.713 | -1.326 | -0.106 | -0.258 | 0.787 | 0.056 | -0.006 | 0.271 | 1.126 | -0.179 | -2.582 | -1.326 | 0.114 | -1.112 |
15 | -0.541 | -0.541 | 0.056 | -1.452 | -1.213 | -0.179 | 0.246 | -1.598 | 0.195 | 1.084 | 1.224 | -0.142 | -1.598 | -0.39 | 0.294 | -1.326 |