Model info
| Transcription factor | Fosb | ||||||||
| Model | FOSB_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 9 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vTGAGTCAb | ||||||||
| Best auROC (human) | 0.975 | ||||||||
| Best auROC (mouse) | 0.925 | ||||||||
| Peak sets in benchmark (human) | 2 | ||||||||
| Peak sets in benchmark (mouse) | 27 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Fos-related factors {1.1.2} | ||||||||
| TF subfamily | Fos factors {1.1.2.1} | ||||||||
| MGI | MGI:95575 | ||||||||
| EntrezGene | GeneID:14282 (SSTAR profile) | ||||||||
| UniProt ID | FOSB_MOUSE | ||||||||
| UniProt AC | P13346 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Fosb expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 199.0 | 130.0 | 141.0 | 30.0 |
| 02 | 8.0 | 6.0 | 14.0 | 472.0 |
| 03 | 9.0 | 12.0 | 441.0 | 38.0 |
| 04 | 441.0 | 11.0 | 5.0 | 43.0 |
| 05 | 0.0 | 0.0 | 398.0 | 102.0 |
| 06 | 9.0 | 28.0 | 28.0 | 435.0 |
| 07 | 29.0 | 456.0 | 4.0 | 11.0 |
| 08 | 484.0 | 6.0 | 2.0 | 8.0 |
| 09 | 23.0 | 161.0 | 122.0 | 194.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.46 | 0.039 | 0.119 | -1.389 |
| 02 | -2.584 | -2.819 | -2.096 | 1.32 |
| 03 | -2.484 | -2.234 | 1.252 | -1.163 |
| 04 | 1.252 | -2.311 | -2.961 | -1.044 |
| 05 | -4.4 | -4.4 | 1.15 | -0.201 |
| 06 | -2.484 | -1.454 | -1.454 | 1.238 |
| 07 | -1.421 | 1.285 | -3.126 | -2.311 |
| 08 | 1.345 | -2.819 | -3.573 | -2.584 |
| 09 | -1.64 | 0.25 | -0.024 | 0.435 |