Model info
Transcription factorFOXA1
ModelFOXA1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusTGTTTACWYWdb
Best auROC (human)0.9881628940583935
Best auROC (mouse)0.9743991379777999
Peak sets in benchmark (human)199
Peak sets in benchmark (mouse)28
Aligned words500
TF familyForkhead box (FOX) factors{3.3.1}
TF subfamilyFOXA{3.3.1.1}
HGNC5021
EntrezGene3169
UniProt IDFOXA1_HUMAN
UniProt ACP55317
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.90113
0.0005 6.01702
0.0001 8.25195
PCM
ACGT
018.00.00.0492.0
02123.02.0375.00.0
031.00.00.0499.0
042.00.028.0470.0
050.00.072.0428.0
06391.00.0103.06.0
074.0399.04.093.0
08159.069.02.0270.0
0916.0157.054.0273.0
10232.010.08.0250.0
11109.049.0247.095.0
1254.0130.0197.0119.0
PWM
ACGT
01-2.584-4.4-4.41.361
02-0.016-3.5731.09-4.4
03-3.903-4.4-4.41.375
04-3.573-4.4-1.4541.315
05-4.4-4.4-0.5431.222
061.132-4.4-0.191-2.819
07-3.1261.152-3.126-0.291
080.238-0.584-3.5730.763
09-1.9750.225-0.8230.774
100.613-2.394-2.5840.687
11-0.135-0.9180.675-0.271
12-0.8230.0390.45-0.049