Model info
Transcription factorFOXA2
ModelFOXA2_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusTGTTTACWbWdb
Best auROC (human)0.9819481396537261
Best auROC (mouse)0.9881869537374977
Peak sets in benchmark (human)22
Peak sets in benchmark (mouse)34
Aligned words500
TF familyForkhead box (FOX) factors{3.3.1}
TF subfamilyFOXA{3.3.1.1}
HGNC5022
EntrezGene3170
UniProt IDFOXA2_HUMAN
UniProt ACQ9Y261
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.70381
0.0005 5.81622
0.0001 8.14197
PCM
ACGT
018.00.01.0491.0
0298.01.0400.01.0
030.02.00.0498.0
041.00.022.0477.0
050.00.072.0428.0
06379.00.0118.03.0
074.0444.01.051.0
08201.061.00.0238.0
0922.0205.060.0213.0
10282.04.020.0194.0
1195.048.0275.082.0
1264.0179.0141.0116.0
PWM
ACGT
01-2.584-4.4-3.9031.359
02-0.24-3.9031.155-3.903
03-4.4-3.573-4.41.373
04-3.903-4.4-1.6811.33
05-4.4-4.4-0.5431.222
061.101-4.4-0.057-3.325
07-3.1261.259-3.903-0.879
080.47-0.705-4.40.638
09-1.6810.49-0.7210.528
100.807-3.126-1.770.435
11-0.271-0.9380.782-0.415
12-0.6580.3550.119-0.074