Model info
Transcription factorFoxa3
ModelFOXA3_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusbhTGTTTACWbWd
Best auROC (human)
Best auROC (mouse)0.9876773159501291
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)6
Aligned words500
TF familyForkhead box (FOX) factors{3.3.1}
TF subfamilyFOXA{3.3.1.1}
MGI1347477
EntrezGene15377
UniProt IDFOXA3_MOUSE
UniProt ACP35584
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.10751
0.0005 6.08211
0.0001 8.10154
GTEx tissue expression atlas Foxa3 expression
ReMap ChIP-seq dataset list Foxa3 datasets
Motifs in JASPAR
PCM
ACGT
0179.0233.0108.080.0
02114.0125.039.0222.0
036.00.03.0491.0
04123.04.0369.04.0
054.011.07.0478.0
063.00.018.0479.0
074.00.0136.0360.0
08428.03.057.012.0
092.0437.011.050.0
10184.076.04.0236.0
1147.0116.053.0284.0
12213.07.027.0253.0
1377.058.0289.076.0
PWM
ACGT
01-0.4520.617-0.144-0.439
02-0.0910.0-1.1380.569
03-2.819-4.4-3.3251.359
04-0.016-3.1261.074-3.126
05-3.126-2.311-2.6941.332
06-3.325-4.4-1.8681.334
07-3.126-4.40.0831.05
081.222-3.325-0.771-2.234
09-3.5731.243-2.311-0.898
100.383-0.49-3.1260.63
11-0.958-0.074-0.8410.814
120.528-2.694-1.4890.699
13-0.477-0.7540.831-0.49