Model info
Transcription factorFoxa3
ModelFOXA3_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusbhTGTTTACWbWd
Best auROC (human)
Best auROC (mouse)0.988
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)6
Aligned words500
TF familyForkhead box (FOX) factors {3.3.1}
TF subfamilyFOXA {3.3.1.1}
MGIMGI:1347477
EntrezGeneGeneID:15377
(SSTAR profile)
UniProt IDFOXA3_MOUSE
UniProt ACP35584
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.11261
0.0005 6.07841
0.0001 8.102345
GTEx tissue expression atlas Foxa3 expression
Motifs in JASPAR
PCM
ACGT
0179.0233.0108.080.0
02114.0125.039.0222.0
036.00.03.0491.0
04123.04.0369.04.0
054.011.07.0478.0
063.00.018.0479.0
074.00.0136.0360.0
08428.03.057.012.0
092.0437.011.050.0
10184.076.04.0236.0
1147.0116.053.0284.0
12213.07.027.0253.0
1377.058.0289.076.0
PWM
ACGT
01-0.4520.617-0.144-0.439
02-0.0910.0-1.1380.569
03-2.819-4.4-3.3251.359
04-0.016-3.1261.074-3.126
05-3.126-2.311-2.6941.332
06-3.325-4.4-1.8681.334
07-3.126-4.40.0831.05
081.222-3.325-0.771-2.234
09-3.5731.243-2.311-0.898
100.383-0.49-3.1260.63
11-0.958-0.074-0.8410.814
120.528-2.694-1.4890.699
13-0.477-0.7540.831-0.49