Model info
| Transcription factor | Foxd1 | ||||||||
| Model | FOXD1_MOUSE.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 15 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | nhhTSTTTAChWhvR | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 22 | ||||||||
| TF family | |||||||||
| TF subfamily | |||||||||
| MGI | MGI:1347463 | ||||||||
| EntrezGene | GeneID:15229 (SSTAR profile) | ||||||||
| UniProt ID | FOXD1_MOUSE | ||||||||
| UniProt AC | Q61345 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Foxd1 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2.627 | 12.502 | 2.627 | 4.244 |
| 02 | 8.317 | 2.425 | 1.617 | 9.642 |
| 03 | 7.796 | 3.754 | 2.137 | 8.313 |
| 04 | 0.808 | 0.808 | 1.617 | 18.767 |
| 05 | 0.808 | 5.367 | 15.017 | 0.808 |
| 06 | 0.808 | 0.808 | 0.808 | 19.575 |
| 07 | 0.0 | 0.0 | 0.808 | 21.192 |
| 08 | 0.0 | 0.0 | 0.808 | 21.192 |
| 09 | 20.383 | 0.0 | 0.808 | 0.808 |
| 10 | 0.0 | 18.767 | 2.425 | 0.808 |
| 11 | 6.7 | 5.367 | 1.617 | 8.317 |
| 12 | 4.559 | 1.617 | 0.0 | 15.825 |
| 13 | 9.933 | 4.559 | 1.617 | 5.892 |
| 14 | 9.358 | 5.367 | 4.85 | 2.425 |
| 15 | 5.771 | 5.254 | 10.571 | 0.404 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.613 | 0.75 | -0.613 | -0.223 |
| 02 | 0.371 | -0.674 | -0.965 | 0.507 |
| 03 | 0.312 | -0.326 | -0.768 | 0.37 |
| 04 | -1.378 | -1.378 | -0.965 | 1.136 |
| 05 | -1.378 | -0.021 | 0.923 | -1.378 |
| 06 | -1.378 | -1.378 | -1.378 | 1.177 |
| 07 | -2.094 | -2.094 | -1.378 | 1.253 |
| 08 | -2.094 | -2.094 | -1.378 | 1.253 |
| 09 | 1.216 | -2.094 | -1.378 | -1.378 |
| 10 | -2.094 | 1.136 | -0.674 | -1.378 |
| 11 | 0.175 | -0.021 | -0.965 | 0.371 |
| 12 | -0.163 | -0.965 | -2.094 | 0.973 |
| 13 | 0.535 | -0.163 | -0.965 | 0.061 |
| 14 | 0.479 | -0.021 | -0.109 | -0.674 |
| 15 | 0.042 | -0.04 | 0.592 | -1.673 |