Model info
Transcription factorFoxf1
ModelFOXF1_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length11
Quality
D
Motif rank
0
ConsensusnTGTTTATbWW
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words8
TF familyForkhead box (FOX) factors{3.3.1}
TF subfamilyFOXF{3.3.1.6}
MGI1347470
EntrezGene15227
UniProt IDFOXF1_MOUSE
UniProt ACQ61080
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.72357
0.0005 6.37992
0.0001 7.79358
GTEx tissue expression atlas Foxf1 expression
Motifs in JASPAR
PCM
ACGT
013.3241.2061.2062.265
020.00.00.08.0
031.0590.06.9410.0
040.00.00.08.0
050.00.00.08.0
060.00.00.08.0
075.8820.5291.5880.0
080.01.0590.06.941
090.1471.2061.2065.441
102.1181.3530.04.529
113.4710.00.2944.235
PWM
ACGT
010.422-0.379-0.3790.1
02-1.578-1.578-1.5781.218
03-0.468-1.5781.085-1.578
04-1.578-1.578-1.5781.218
05-1.578-1.578-1.5781.218
06-1.578-1.578-1.5781.218
070.932-0.876-0.178-1.578
08-1.578-0.468-1.5781.085
09-1.329-0.379-0.3790.861
100.046-0.297-1.5780.695
110.46-1.578-1.130.635