Model info
Transcription factorFoxf1
ModelFOXF1_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length11
Quality
D
Motif rank
0
ConsensusnTGTTTATbWW
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words8
TF familyForkhead box (FOX) factors{3.3.1}
TF subfamilyFOXF{3.3.1.6}
MGI1347470
EntrezGene15227
UniProt IDFOXF1_MOUSE
UniProt ACQ61080
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.72357
0.0005 6.37992
0.0001 7.79358
GTEx tissue expression atlas Foxf1 expression
ReMap ChIP-seq dataset list Foxf1 datasets
Motifs in JASPAR
PCM
ACGT
013.3241.2061.2062.265
020.00.00.08.0
031.0590.06.9410.0
040.00.00.08.0
050.00.00.08.0
060.00.00.08.0
075.8820.5291.5880.0
080.01.0590.06.941
090.1471.2061.2065.441
102.1181.3530.04.529
113.4710.00.2944.235
PWM
ACGT
010.422-0.379-0.3790.1
02-1.578-1.578-1.5781.218
03-0.468-1.5781.085-1.578
04-1.578-1.578-1.5781.218
05-1.578-1.578-1.5781.218
06-1.578-1.578-1.5781.218
070.932-0.876-0.178-1.578
08-1.578-0.468-1.5781.085
09-1.329-0.379-0.3790.861
100.046-0.297-1.5780.695
110.46-1.578-1.130.635