Model info
Transcription factorGABPA
ModelGABPA_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensusvvnvSCGGAAGYvv
Best auROC (human)0.9877088225170461
Best auROC (mouse)0.9485352196063388
Peak sets in benchmark (human)92
Peak sets in benchmark (mouse)8
Aligned words500
TF familyEts-related factors{3.5.2}
TF subfamilyEts-like factors{3.5.2.1}
HGNC4071
EntrezGene2551
UniProt IDGABPA_HUMAN
UniProt ACQ06546
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.96641
0.0005 4.03691
0.0001 6.14811
PCM
ACGT
0191.0113.0242.054.0
02143.0126.0193.038.0
03182.0115.0135.068.0
04215.073.0192.020.0
0549.0306.0135.010.0
0656.0428.013.03.0
074.00.0496.00.0
084.02.0493.01.0
09498.00.02.00.0
10493.01.00.06.0
1153.012.0434.01.0
1249.094.016.0341.0
1389.065.0285.061.0
14144.0135.0192.029.0
PWM
ACGT
01-0.313-0.10.655-0.823
020.1330.0080.43-1.163
030.372-0.0820.076-0.599
040.537-0.5290.425-1.77
05-0.9180.8880.076-2.394
06-0.7881.222-2.163-3.325
07-3.126-4.41.369-4.4
08-3.126-3.5731.363-3.903
091.373-4.4-3.573-4.4
101.363-3.903-4.4-2.819
11-0.841-2.2341.236-3.903
12-0.918-0.281-1.9750.996
13-0.335-0.6430.817-0.705
140.140.0760.425-1.421