Model info
Transcription factorGabpa
ModelGABPA_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusvvvSMGGAAGYRvnv
Best auROC (human)0.988
Best auROC (mouse)0.957
Peak sets in benchmark (human)92
Peak sets in benchmark (mouse)8
Aligned words503
TF familyEts-related factors {3.5.2}
TF subfamilyEts-like factors {3.5.2.1}
MGIMGI:95610
EntrezGeneGeneID:14390
(SSTAR profile)
UniProt IDGABPA_MOUSE
UniProt ACQ00422
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 8.567810000000001
0.0005 10.30826
0.0001 13.70966
GTEx tissue expression atlas Gabpa expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0126.010.059.019.040.041.031.026.096.033.047.020.013.06.022.011.0
0275.037.050.013.029.014.038.09.074.011.064.010.023.013.027.013.0
0311.0103.077.010.03.061.03.08.019.0111.042.07.010.023.010.02.0
0421.015.04.03.055.0227.04.012.043.083.01.05.011.07.03.06.0
056.00.0120.04.019.05.0303.05.01.00.011.00.05.00.020.01.0
061.02.028.00.00.00.04.01.03.03.0446.02.00.00.09.01.0
074.00.00.00.05.00.00.00.0480.01.04.02.04.00.00.00.0
08480.01.03.09.01.00.00.00.04.00.00.00.02.00.00.00.0
0991.08.0382.06.01.00.00.00.00.00.03.00.04.01.04.00.0
107.019.014.056.00.02.00.07.036.061.035.0257.02.00.02.02.0
117.01.030.07.023.09.037.013.011.09.026.05.028.035.0225.034.0
1219.05.043.02.014.013.021.06.0100.061.0125.032.010.013.032.04.0
1336.057.033.017.024.039.019.010.068.064.055.034.06.018.012.08.0
1441.026.045.022.022.034.091.031.021.020.059.019.012.024.022.011.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.181-1.1140.63-0.490.2440.269-0.008-0.1811.1140.0540.404-0.439-0.86-1.6-0.346-1.022
020.8680.1670.465-0.86-0.074-0.7880.193-1.2150.855-1.0220.711-1.114-0.302-0.86-0.144-0.86
03-1.0221.1840.894-1.114-2.2340.663-2.234-1.328-0.491.2590.293-1.454-1.114-0.302-1.114-2.584
04-0.392-0.721-1.975-2.2340.561.972-1.975-0.9380.3160.969-3.126-1.77-1.022-1.454-2.234-1.6
05-1.6-4.41.336-1.975-0.49-1.772.261-1.77-3.126-4.4-1.022-4.4-1.77-4.4-0.439-3.126
06-3.126-2.584-0.108-4.4-4.4-4.4-1.975-3.126-2.234-2.2342.647-2.584-4.4-4.4-1.215-3.126
07-1.975-4.4-4.4-4.4-1.77-4.4-4.4-4.42.72-3.126-1.975-2.584-1.975-4.4-4.4-4.4
082.72-3.126-2.234-1.215-3.126-4.4-4.4-4.4-1.975-4.4-4.4-4.4-2.584-4.4-4.4-4.4
091.061-1.3282.492-1.6-3.126-4.4-4.4-4.4-4.4-4.4-2.234-4.4-1.975-3.126-1.975-4.4
10-1.454-0.49-0.7880.578-4.4-2.584-4.4-1.4540.140.6630.1122.096-2.584-4.4-2.584-2.584
11-1.454-3.126-0.04-1.454-0.302-1.2150.167-0.86-1.022-1.215-0.181-1.77-0.1080.1121.9630.083
12-0.49-1.770.316-2.584-0.788-0.86-0.392-1.61.1550.6631.3770.023-1.114-0.860.023-1.975
130.140.5950.054-0.599-0.260.219-0.49-1.1140.7710.7110.560.083-1.6-0.543-0.938-1.328
140.269-0.1810.361-0.346-0.3460.0831.061-0.008-0.392-0.4390.63-0.49-0.938-0.26-0.346-1.022