Model info
Transcription factorGata1
ModelGATA1_MOUSE.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
1
ConsensusdbAGATAASvv
Best auROC (human)0.972
Best auROC (mouse)0.95
Peak sets in benchmark (human)48
Peak sets in benchmark (mouse)122
Aligned words500
TF familyGATA-type zinc fingers {2.2.1}
TF subfamilyTwo zinc-finger GATA factors {2.2.1.1}
MGIMGI:95661
EntrezGeneGeneID:14460
(SSTAR profile)
UniProt IDGATA1_MOUSE
UniProt ACP17679
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.844930000000001
0.0005 6.106775
0.0001 8.008770000000002
GTEx tissue expression atlas Gata1 expression
Motifs in JASPAR
PCM
ACGT
01149.075.0185.091.0
0265.0193.0173.069.0
03363.08.03.0126.0
040.00.0499.01.0
05497.01.00.02.0
060.05.03.0492.0
07489.02.00.09.0
08420.01.069.010.0
0970.093.0316.021.0
10179.0122.0171.028.0
11166.099.0168.067.0
PWM
ACGT
010.174-0.5030.388-0.313
02-0.6430.430.322-0.584
031.058-2.584-3.3250.008
04-4.4-4.41.375-3.903
051.371-3.903-4.4-3.573
06-4.4-2.961-3.3251.361
071.355-3.573-4.4-2.484
081.203-3.903-0.584-2.394
09-0.57-0.2910.92-1.725
100.355-0.0240.31-1.454
110.281-0.230.293-0.613