Model info
Transcription factorGATA3
ModelGATA3_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensusdvAGATAAvvd
Best auROC (human)0.9011814370736881
Best auROC (mouse)0.893202075640153
Peak sets in benchmark (human)98
Peak sets in benchmark (mouse)60
Aligned words500
TF familyGATA-type zinc fingers{2.2.1}
TF subfamilyTwo zinc-finger GATA factors{2.2.1.1}
HGNC4172
EntrezGene2625
UniProt IDGATA3_HUMAN
UniProt ACP23771
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.83155
0.0005 6.65482
0.0001 8.18854
GTEx tissue expression atlas GATA3 expression
ReMap ChIP-seq dataset list GATA3 datasets
Motifs in JASPAR
PCM
ACGT
01224.046.0127.0103.0
02174.0152.0131.043.0
03389.03.04.0104.0
045.02.0493.00.0
05494.02.03.01.0
0673.05.020.0402.0
07461.08.021.010.0
08434.01.047.018.0
09165.0112.0202.021.0
10279.060.0128.033.0
11222.040.0112.0126.0
PWM
ACGT
010.578-0.9790.016-0.191
020.3270.1930.046-1.044
031.127-3.325-3.126-0.181
04-2.961-3.5731.363-4.4
051.365-3.573-3.325-3.903
06-0.529-2.961-1.771.16
071.296-2.584-1.725-2.394
081.236-3.903-0.958-1.868
090.275-0.1080.475-1.725
100.796-0.7210.023-1.298
110.569-1.114-0.1080.008