Model info
Transcription factorGata3
ModelGATA3_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusdvAGATARvvdbh
Best auROC (human)0.902511457444951
Best auROC (mouse)0.9120937844460345
Peak sets in benchmark (human)98
Peak sets in benchmark (mouse)60
Aligned words500
TF familyGATA-type zinc fingers{2.2.1}
TF subfamilyTwo zinc-finger GATA factors{2.2.1.1}
MGI95663
EntrezGene14462
UniProt IDGATA3_MOUSE
UniProt ACP23772
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.46051
0.0005 6.31291
0.0001 7.94661
GTEx tissue expression atlas Gata3 expression
ReMap ChIP-seq dataset list Gata3 datasets
Motifs in JASPAR
PCM
ACGT
01194.071.0141.094.0
02141.0184.0125.050.0
03364.09.04.0123.0
043.00.0496.01.0
05494.03.02.01.0
069.010.025.0456.0
07434.011.03.052.0
08372.019.090.019.0
09101.0153.0214.032.0
10255.0117.0115.013.0
11265.048.070.0117.0
1254.0152.090.0204.0
13134.0198.055.0113.0
PWM
ACGT
010.435-0.5560.119-0.281
020.1190.3830.0-0.898
031.061-2.484-3.126-0.016
04-3.325-4.41.369-3.903
051.365-3.325-3.573-3.903
06-2.484-2.394-1.5611.285
071.236-2.311-3.325-0.86
081.082-1.818-0.324-1.818
09-0.210.20.533-1.328
100.707-0.065-0.082-2.163
110.745-0.938-0.57-0.065
12-0.8230.193-0.3240.485
130.0690.455-0.805-0.1