Model info
Transcription factorGata4
ModelGATA4_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusndnndvWGATAARvn
Best auROC (human)0.9468566890376983
Best auROC (mouse)0.948549447331723
Peak sets in benchmark (human)15
Peak sets in benchmark (mouse)17
Aligned words428
TF familyGATA-type zinc fingers{2.2.1}
TF subfamilyTwo zinc-finger GATA factors{2.2.1.1}
MGI95664
EntrezGene14463
UniProt IDGATA4_MOUSE
UniProt ACQ08369
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.60621
0.0005 11.75371
0.0001 16.29472
GTEx tissue expression atlas Gata4 expression
ReMap ChIP-seq dataset list Gata4 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0114.019.070.027.015.016.03.027.029.018.053.012.022.026.051.022.0
0227.09.026.018.030.011.04.034.059.031.052.035.018.09.027.034.0
0328.016.063.027.025.013.03.019.040.015.035.019.022.013.052.034.0
0453.010.034.018.040.05.04.08.065.013.064.011.045.04.033.017.0
0559.069.060.015.011.014.03.04.023.064.038.010.024.015.012.03.0
0699.01.02.015.093.06.00.063.088.01.03.021.027.00.01.04.0
071.00.0306.00.01.00.07.00.00.00.06.00.00.00.0103.00.0
082.00.00.00.00.00.00.00.0421.00.01.00.00.00.00.00.0
092.03.07.0411.00.00.00.00.00.00.00.01.00.00.00.00.0
102.00.00.00.01.00.02.00.07.00.00.00.0391.03.010.08.0
11378.09.011.03.03.00.00.00.010.01.01.00.08.00.00.00.0
1261.052.0270.016.01.03.06.00.03.02.07.00.00.00.03.00.0
1320.013.026.06.039.06.07.05.0145.045.093.03.04.05.07.00.0
1452.020.060.076.022.020.010.017.035.033.030.035.03.06.02.03.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.626-0.3270.9630.018-0.558-0.495-2.0740.0180.089-0.380.686-0.775-0.183-0.0190.648-0.183
020.018-1.053-0.019-0.380.122-0.86-1.8150.2460.7930.1550.6670.275-0.38-1.0530.0180.246
030.054-0.4950.8580.018-0.057-0.698-2.074-0.3270.407-0.5580.275-0.327-0.183-0.6980.6670.246
040.686-0.9520.246-0.380.407-1.609-1.815-1.1660.889-0.6980.873-0.860.524-1.8150.217-0.436
050.7930.9480.809-0.558-0.86-0.626-2.074-1.815-0.140.8730.356-0.952-0.098-0.558-0.775-2.074
061.308-2.971-2.425-0.5581.245-1.438-4.2640.8581.19-2.971-2.074-0.2290.018-4.264-2.971-1.815
07-2.971-4.2642.434-4.264-2.971-4.264-1.293-4.264-4.264-4.264-1.438-4.264-4.264-4.2641.347-4.264
08-2.425-4.264-4.264-4.264-4.264-4.264-4.264-4.2642.752-4.264-2.971-4.264-4.264-4.264-4.264-4.264
09-2.425-2.074-1.2932.728-4.264-4.264-4.264-4.264-4.264-4.264-4.264-2.971-4.264-4.264-4.264-4.264
10-2.425-4.264-4.264-4.264-2.971-4.264-2.425-4.264-1.293-4.264-4.264-4.2642.678-2.074-0.952-1.166
112.645-1.053-0.86-2.074-2.074-4.264-4.264-4.264-0.952-2.971-2.971-4.264-1.166-4.264-4.264-4.264
120.8260.6672.309-0.495-2.971-2.074-1.438-4.264-2.074-2.425-1.293-4.264-4.264-4.264-2.074-4.264
13-0.277-0.698-0.019-1.4380.382-1.438-1.293-1.6091.6880.5241.245-2.074-1.815-1.609-1.293-4.264
140.667-0.2770.8091.044-0.183-0.277-0.952-0.4360.2750.2170.1220.275-2.074-1.438-2.425-2.074