Model info
Transcription factorNR3C1
ModelGCR_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusdGdACWnAvWGTnCh
Best auROC (human)0.9779199642277063
Best auROC (mouse)0.9890361241432566
Peak sets in benchmark (human)143
Peak sets in benchmark (mouse)119
Aligned words500
TF familySteroid hormone receptors (NR3){2.1.1}
TF subfamilyGR-like receptors (NR3C){2.1.1.1}
HGNC7978
EntrezGene2908
UniProt IDGCR_HUMAN
UniProt ACP04150
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.49091
0.0005 5.45461
0.0001 7.45051
PCM
ACGT
01235.023.0177.065.0
0246.05.0419.030.0
03222.078.0109.091.0
04449.013.014.024.0
056.0474.013.07.0
06381.014.045.060.0
0779.0149.0176.096.0
08316.0184.00.00.0
09201.0142.0109.048.0
1090.027.018.0365.0
117.011.0477.05.0
1226.019.012.0443.0
1395.0133.091.0181.0
1431.0424.03.042.0
1588.0176.013.0223.0
PWM
ACGT
010.626-1.640.344-0.643
02-0.979-2.9611.201-1.389
030.569-0.464-0.135-0.313
041.27-2.163-2.096-1.6
05-2.8191.324-2.163-2.694
061.106-2.096-1.0-0.721
07-0.4520.1740.339-0.26
080.920.383-4.4-4.4
090.470.126-0.135-0.938
10-0.324-1.489-1.8681.063
11-2.694-2.3111.33-2.961
12-1.525-1.818-2.2341.256
13-0.2710.061-0.3130.366
14-1.3581.213-3.325-1.067
15-0.3460.339-2.1630.573