Model info
Transcription factorNr3c1
ModelGCR_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusRGdACAbAvWGThCY
Best auROC (human)0.9776798968239038
Best auROC (mouse)0.9896453498386726
Peak sets in benchmark (human)143
Peak sets in benchmark (mouse)119
Aligned words500
TF familySteroid hormone receptors (NR3){2.1.1}
TF subfamilyGR-like receptors (NR3C){2.1.1.1}
MGI95824
EntrezGene
UniProt IDGCR_MOUSE
UniProt ACP06537
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.37581
0.0005 5.41021
0.0001 7.52551
GTEx tissue expression atlas Nr3c1 expression
ReMap ChIP-seq dataset list Nr3c1 datasets
Motifs in JASPAR
PCM
ACGT
01233.010.0202.055.0
0234.04.0422.040.0
03175.083.0158.084.0
04431.013.012.044.0
050.0486.09.05.0
06409.09.025.057.0
0776.0125.0202.097.0
08315.00.0185.00.0
09189.0129.0150.032.0
1083.043.021.0353.0
1111.03.0483.03.0
1227.09.016.0448.0
1381.0159.070.0190.0
1427.0433.02.038.0
1554.0194.017.0235.0
PWM
ACGT
010.617-2.3940.475-0.805
02-1.27-3.1261.208-1.114
030.333-0.4030.232-0.392
041.229-2.163-2.234-1.022
05-4.41.349-2.484-2.961
061.177-2.484-1.561-0.771
07-0.490.00.475-0.25
080.917-4.40.388-4.4
090.4090.0310.18-1.328
10-0.403-1.044-1.7251.03
11-2.311-3.3251.343-3.325
12-1.489-2.484-1.9751.268
13-0.4270.238-0.570.415
14-1.4891.234-3.573-1.163
15-0.8230.435-1.920.626