Model info
Transcription factorGFI1
ModelGFI1_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length10
Quality
C
Motif rank
0
ConsensusRShSWGATTb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words152
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyGFI1 factors{2.3.3.21}
HGNC4237
EntrezGene2672
UniProt IDGFI1_HUMAN
UniProt ACQ99684
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.53358
0.0005 6.43254
0.0001 8.00848
PCM
ACGT
0143.58510.39587.8657.692
0211.626102.36620.83314.711
0360.5915.01111.31262.624
047.77842.69584.20914.855
0535.7712.53911.95899.269
060.00.0149.5370.0
07149.5370.00.00.0
080.00.00.0149.537
090.00.00.0149.537
1015.47717.65528.53587.869
PWM
ACGT
010.149-1.1990.836-1.463
02-1.0990.987-0.559-0.884
030.47-0.865-1.1230.503
04-1.4540.1290.794-0.875
05-0.043-2.322-1.0730.956
06-3.43-3.431.362-3.43
071.362-3.43-3.43-3.43
08-3.43-3.43-3.431.362
09-3.43-3.43-3.431.362
10-0.837-0.715-0.260.836