Model info
Transcription factorGli1
ModelGLI1_MOUSE.H11DI.0.B
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
B
Motif rank
0
ConsensusnvnnbSTGGGTGGYChn
Best auROC (human)0.6709009156746579
Best auROC (mouse)0.952726147551049
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)3
Aligned words501
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyGLI-like factors{2.3.3.1}
MGI95727
EntrezGene14632
UniProt IDGLI1_MOUSE
UniProt ACP47806
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.45761
0.0005 8.64011
0.0001 13.27801
GTEx tissue expression atlas Gli1 expression
ReMap ChIP-seq dataset list Gli1 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0127.054.030.04.014.062.014.04.020.094.018.014.09.076.049.011.0
0218.021.021.010.078.048.046.0114.025.036.020.030.02.013.010.08.0
0339.033.031.020.028.034.016.040.027.032.025.013.023.060.043.036.0
0417.045.026.029.022.056.010.071.013.044.022.036.04.051.028.026.0
051.026.027.02.010.0107.046.033.02.045.036.03.01.050.0105.06.0
063.00.00.011.025.028.02.0173.05.023.06.0180.00.03.01.040.0
072.04.022.05.05.02.037.010.02.02.03.02.09.011.0375.09.0
082.00.016.00.00.01.014.04.02.01.0338.096.00.02.020.04.0
091.01.02.00.00.00.04.00.00.06.0381.01.00.06.098.00.0
100.00.00.01.01.00.02.010.035.013.06.0431.00.00.00.01.0
112.01.033.00.00.00.013.00.00.01.07.00.02.03.0438.00.0
120.01.02.01.01.00.03.01.09.04.0464.014.00.00.00.00.0
130.04.02.04.01.02.01.01.08.0106.058.0297.00.06.05.05.0
142.03.03.01.07.096.07.08.05.057.03.01.013.0278.011.05.0
157.07.04.09.034.0166.023.0211.07.07.06.04.01.06.04.04.0
1616.06.020.07.055.046.023.062.05.016.010.06.028.076.081.043.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.1440.542-0.04-1.975-0.7880.679-0.788-1.975-0.4391.093-0.543-0.788-1.2150.8810.445-1.022
02-0.543-0.392-0.392-1.1140.9070.4250.3831.285-0.220.14-0.439-0.04-2.584-0.86-1.114-1.328
030.2190.054-0.008-0.439-0.1080.083-0.6580.244-0.1440.023-0.22-0.86-0.3020.6460.3160.14
04-0.5990.361-0.181-0.074-0.3460.578-1.1140.814-0.860.339-0.3460.14-1.9750.485-0.108-0.181
05-3.126-0.181-0.144-2.584-1.1141.2220.3830.054-2.5840.3610.14-2.234-3.1260.4651.203-1.6
06-2.234-4.4-4.4-1.022-0.22-0.108-2.5841.701-1.77-0.302-1.61.741-4.4-2.234-3.1260.244
07-2.584-1.975-0.346-1.77-1.77-2.5840.167-1.114-2.584-2.584-2.234-2.584-1.215-1.0222.474-1.215
08-2.584-4.4-0.658-4.4-4.4-3.126-0.788-1.975-2.584-3.1262.371.114-4.4-2.584-0.439-1.975
09-3.126-3.126-2.584-4.4-4.4-4.4-1.975-4.4-4.4-1.62.489-3.126-4.4-1.61.135-4.4
10-4.4-4.4-4.4-3.126-3.126-4.4-2.584-1.1140.112-0.86-1.62.613-4.4-4.4-4.4-3.126
11-2.584-3.1260.054-4.4-4.4-4.4-0.86-4.4-4.4-3.126-1.454-4.4-2.584-2.2342.629-4.4
12-4.4-3.126-2.584-3.126-3.126-4.4-2.234-3.126-1.215-1.9752.686-0.788-4.4-4.4-4.4-4.4
13-4.4-1.975-2.584-1.975-3.126-2.584-3.126-3.126-1.3281.2130.6132.241-4.4-1.6-1.77-1.77
14-2.584-2.234-2.234-3.126-1.4541.114-1.454-1.328-1.770.595-2.234-3.126-0.862.175-1.022-1.77
15-1.454-1.454-1.975-1.2150.0831.66-0.3021.899-1.454-1.454-1.6-1.975-3.126-1.6-1.975-1.975
16-0.658-1.6-0.439-1.4540.560.383-0.3020.679-1.77-0.658-1.114-1.6-0.1080.8810.9450.316