Model info
Transcription factorGli1
ModelGLI1_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
C
Motif rank
0
ConsensusbSTGGGTGGYCh
Best auROC (human)0.5611573100392913
Best auROC (mouse)0.9744646020478976
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)3
Aligned words500
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyGLI-like factors{2.3.3.1}
MGI95727
EntrezGene14632
UniProt IDGLI1_MOUSE
UniProt ACP47806
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.7863300000000004
0.0005 4.822625
0.0001 7.037889999999999
GTEx tissue expression atlas Gli1 expression
Motifs in JASPAR
PCM
ACGT
0156.0196.092.0156.0
0217.0236.0200.047.0
0335.038.06.0421.0
0410.014.0453.023.0
055.06.0382.0107.0
066.020.0474.00.0
0733.011.010.0446.0
086.04.0487.03.0
098.02.0469.021.0
107.0119.076.0298.0
1121.0440.021.018.0
1258.0180.030.0232.0
PWM
ACGT
01-0.7880.445-0.3020.219
02-1.920.630.465-0.958
03-1.242-1.163-2.8191.206
04-2.394-2.0961.279-1.64
05-2.961-2.8191.109-0.153
06-2.819-1.771.324-4.4
07-1.298-2.311-2.3941.263
08-2.819-3.1261.351-3.325
09-2.584-3.5731.313-1.725
10-2.694-0.049-0.490.862
11-1.7251.25-1.725-1.868
12-0.7540.361-1.3890.613