Model info
Transcription factorGli1
ModelGLI1_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
C
Motif rank
0
ConsensusbSTGGGTGGYCh
Best auROC (human)0.5611573100392913
Best auROC (mouse)0.9744646020478976
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)3
Aligned words500
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyGLI-like factors{2.3.3.1}
MGI95727
EntrezGene14632
UniProt IDGLI1_MOUSE
UniProt ACP47806
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.78101
0.0005 4.82601
0.0001 7.04062
GTEx tissue expression atlas Gli1 expression
ReMap ChIP-seq dataset list Gli1 datasets
Motifs in JASPAR
PCM
ACGT
0156.0196.092.0156.0
0217.0236.0200.047.0
0335.038.06.0421.0
0410.014.0453.023.0
055.06.0382.0107.0
066.020.0474.00.0
0733.011.010.0446.0
086.04.0487.03.0
098.02.0469.021.0
107.0119.076.0298.0
1121.0440.021.018.0
1258.0180.030.0232.0
PWM
ACGT
01-0.7880.445-0.3020.219
02-1.920.630.465-0.958
03-1.242-1.163-2.8191.206
04-2.394-2.0961.279-1.64
05-2.961-2.8191.109-0.153
06-2.819-1.771.324-4.4
07-1.298-2.311-2.3941.263
08-2.819-3.1261.351-3.325
09-2.584-3.5731.313-1.725
10-2.694-0.049-0.490.862
11-1.7251.25-1.725-1.868
12-0.7540.361-1.3890.613