Model info
Transcription factorGli3
ModelGLI3_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
D
Motif rank
0
ConsensusbbWGKGTGGbYb
Best auROC (human)0.52
Best auROC (mouse)0.752
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)3
Aligned words476
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyGLI-like factors {2.3.3.1}
MGIMGI:95729
EntrezGeneGeneID:14634
(SSTAR profile)
UniProt IDGLI3_MOUSE
UniProt ACQ61602
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.53786
0.0005 5.4263200000000005
0.0001 7.240805
GTEx tissue expression atlas Gli3 expression
Motifs in JASPAR
PCM
ACGT
0153.0190.096.0137.0
0224.0251.0144.057.0
0350.043.014.0369.0
044.021.0411.040.0
0517.01.0332.0126.0
062.025.0448.01.0
0784.014.06.0372.0
087.01.0457.011.0
097.025.0425.019.0
1020.0165.060.0231.0
1139.0347.042.048.0
1264.0147.086.0179.0
PWM
ACGT
01-0.7930.463-0.2120.139
02-1.5520.740.188-0.722
03-0.85-0.996-2.0481.123
04-3.08-1.6771.23-1.065
05-1.872-3.8591.0180.056
06-3.527-1.5131.316-3.859
07-0.343-2.048-2.7721.131
08-2.647-3.8591.336-2.263
09-2.647-1.5131.264-1.77
10-1.7220.323-0.6720.657
11-1.091.062-1.018-0.889
12-0.6090.209-0.320.404