Model info
Transcription factorGlis3
ModelGLIS3_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length10
Quality
D
Motif rank
0
ConsensusSYGGGGGGTM
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words38
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyGLI-like factors{2.3.3.1}
MGI2444289
EntrezGene226075
UniProt IDGLIS3_MOUSE
UniProt ACQ6XP49
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.36125
0.0005 5.21226
0.0001 6.70009
GTEx tissue expression atlas Glis3 expression
ReMap ChIP-seq dataset list Glis3 datasets
Motifs in JASPAR
PCM
ACGT
012.057.47927.9780.499
020.99714.5153.54618.947
033.5460.032.4651.994
040.00.030.4717.535
050.9970.99736.0110.0
061.9940.029.036.981
070.00.038.0060.0
081.5510.99732.4652.992
090.9978.5320.028.476
1016.06615.9563.9891.994
PWM
ACGT
01-1.258-0.2161.021-2.001
02-1.6970.393-0.8490.646
03-0.849-2.4381.165-1.277
04-2.438-2.4381.103-0.209
05-1.697-1.6971.266-2.438
06-1.277-2.4381.056-0.277
07-2.438-2.4381.319-2.438
08-1.442-1.6971.165-0.982
09-1.697-0.098-2.4381.038
100.4890.482-0.754-1.277