Model info
Transcription factorGlis3
ModelGLIS3_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length10
Quality
D
Motif rank
0
ConsensusSYGGGGGGTM
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words38
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyGLI-like factors{2.3.3.1}
MGI2444289
EntrezGene226075
UniProt IDGLIS3_MOUSE
UniProt ACQ6XP49
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.36125
0.0005 5.21226
0.0001 6.70009
GTEx tissue expression atlas Glis3 expression
Motifs in JASPAR
PCM
ACGT
012.057.47927.9780.499
020.99714.5153.54618.947
033.5460.032.4651.994
040.00.030.4717.535
050.9970.99736.0110.0
061.9940.029.036.981
070.00.038.0060.0
081.5510.99732.4652.992
090.9978.5320.028.476
1016.06615.9563.9891.994
PWM
ACGT
01-1.258-0.2161.021-2.001
02-1.6970.393-0.8490.646
03-0.849-2.4381.165-1.277
04-2.438-2.4381.103-0.209
05-1.697-1.6971.266-2.438
06-1.277-2.4381.056-0.277
07-2.438-2.4381.319-2.438
08-1.442-1.6971.165-0.982
09-1.697-0.098-2.4381.038
100.4890.482-0.754-1.277