Model info
Transcription factorGMEB2
ModelGMEB2_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusnndTACGTvvn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words4035
TF familyGMEB{5.3.3}
TF subfamilyGMEB{5.3.3.1}
HGNC4371
EntrezGene26205
UniProt IDGMEB2_HUMAN
UniProt ACQ9UKD1
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.17931
0.0005 3.83793
0.0001 5.79062
GTEx tissue expression atlas GMEB2 expression
ReMap ChIP-seq dataset list GMEB2 datasets
Motifs in JASPAR
PCM
ACGT
01668.264994.861197.751841.436
02536.558956.7621178.5291030.463
03402.851266.661205.8781826.923
04135.56180.59694.8783391.278
052511.5688.8951157.2724.579
0626.9383499.467116.32659.581
076.8220.3193672.79122.38
0848.33140.425127.0093486.547
091560.704863.538900.782377.288
101701.148491.2031103.055406.906
11674.418866.092958.5481203.254
PWM
ACGT
01-0.3250.0720.257-0.095
02-0.5440.0330.2410.107
03-0.829-1.2390.2640.679
04-1.908-2.418-2.2591.297
050.997-4.4390.223-3.55
06-3.4661.328-2.059-2.711
07-4.649-5.9681.377-3.637
08-2.913-3.084-1.9721.325
090.522-0.069-0.027-0.894
100.608-0.6320.175-0.819
11-0.316-0.0660.0350.262