Model info
Transcription factorGrhl2
ModelGRHL2_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusRRCYdGTYYddC
Best auROC (human)0.9506498696993753
Best auROC (mouse)0.9511969744905407
Peak sets in benchmark (human)22
Peak sets in benchmark (mouse)4
Aligned words500
TF familyGrainyhead-related factors{6.7.1}
TF subfamilyGRH-like proteins{6.7.1.1}
MGI2182543
EntrezGene252973
UniProt IDGRHL2_MOUSE
UniProt ACQ8K5C0
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.76971
0.0005 5.76303
0.0001 7.67323
GTEx tissue expression atlas Grhl2 expression
Motifs in JASPAR
PCM
ACGT
01346.09.096.049.0
02326.02.089.083.0
030.0493.07.00.0
0465.0355.02.078.0
05113.09.0152.0226.0
060.02.0498.00.0
0716.0103.00.0381.0
0814.0176.010.0300.0
0932.0113.028.0327.0
1058.024.0186.0232.0
11131.029.0149.0191.0
120.0459.04.037.0
PWM
ACGT
011.01-2.484-0.26-0.918
020.951-3.573-0.335-0.403
03-4.41.363-2.694-4.4
04-0.6431.036-3.573-0.464
05-0.1-2.4840.1930.587
06-4.4-3.5731.373-4.4
07-1.975-0.191-4.41.106
08-2.0960.339-2.3940.868
09-1.328-0.1-1.4540.954
10-0.754-1.60.3930.613
110.046-1.4210.1740.42
12-4.41.292-3.126-1.189