Model info
Transcription factorGrhl2
ModelGRHL2_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusRRCYdGTYYddC
Best auROC (human)0.951
Best auROC (mouse)0.951
Peak sets in benchmark (human)22
Peak sets in benchmark (mouse)4
Aligned words500
TF familyGrainyhead-related factors {6.7.1}
TF subfamilyGRH-like proteins {6.7.1.1}
MGIMGI:2182543
EntrezGeneGeneID:252973
(SSTAR profile)
UniProt IDGRHL2_MOUSE
UniProt ACQ8K5C0
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.77591
0.0005 5.75931
0.0001 7.670915
GTEx tissue expression atlas Grhl2 expression
Motifs in JASPAR
PCM
ACGT
01346.09.096.049.0
02326.02.089.083.0
030.0493.07.00.0
0465.0355.02.078.0
05113.09.0152.0226.0
060.02.0498.00.0
0716.0103.00.0381.0
0814.0176.010.0300.0
0932.0113.028.0327.0
1058.024.0186.0232.0
11131.029.0149.0191.0
120.0459.04.037.0
PWM
ACGT
011.01-2.484-0.26-0.918
020.951-3.573-0.335-0.403
03-4.41.363-2.694-4.4
04-0.6431.036-3.573-0.464
05-0.1-2.4840.1930.587
06-4.4-3.5731.373-4.4
07-1.975-0.191-4.41.106
08-2.0960.339-2.3940.868
09-1.328-0.1-1.4540.954
10-0.754-1.60.3930.613
110.046-1.4210.1740.42
12-4.41.292-3.126-1.189