Model info
Transcription factorHand1
ModelHAND1_MOUSE.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length19
Quality
C
Motif rank
0
ConsensusnddvYCTGShhWnYvTCWn
Best auROC (human)
Best auROC (mouse)0.9979133634763122
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)3
Aligned words505
TF familyTal-related factors{1.2.3}
TF subfamilyTwist-like factors{1.2.3.2}
MGI103577
EntrezGene15110
UniProt IDHAND1_MOUSE
UniProt ACQ64279
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.36451
0.0005 11.43576
0.0001 15.61776
GTEx tissue expression atlas Hand1 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0116.09.071.013.039.012.09.037.044.023.069.025.04.015.096.018.0
0213.08.067.015.09.09.08.033.036.038.0116.055.011.012.055.015.0
036.023.034.06.020.016.010.021.041.049.0126.030.020.034.059.05.0
041.035.01.050.07.039.00.076.011.0110.019.089.01.022.08.031.0
051.019.00.00.011.0192.01.02.01.026.01.00.03.0241.02.00.0
060.00.00.016.05.00.00.0473.00.00.00.04.00.00.00.02.0
070.00.05.00.00.00.00.00.00.00.00.00.00.01.0493.01.0
080.00.00.00.00.00.00.01.01.099.0329.069.00.00.01.00.0
090.00.01.00.013.013.04.069.089.0103.045.093.02.015.015.038.0
1031.018.029.026.019.026.00.086.022.014.011.018.026.047.018.0109.0
1143.08.03.044.047.05.01.052.028.09.02.019.053.041.06.0139.0
1246.020.076.029.04.027.02.030.01.05.04.02.042.064.058.090.0
130.028.03.062.04.026.00.086.06.026.014.094.07.047.015.082.0
144.06.05.02.044.036.020.027.08.017.05.02.028.087.0182.027.0
150.00.04.080.04.07.00.0135.06.07.020.0179.01.03.01.053.0
160.07.02.02.03.012.02.00.01.020.02.02.08.0386.022.031.0
179.01.01.01.0263.041.017.0104.06.09.01.012.017.03.05.010.0
1876.079.0102.038.018.012.04.020.09.04.08.03.022.033.044.028.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.658-1.2150.814-0.860.219-0.938-1.2150.1670.339-0.3020.785-0.22-1.975-0.7211.114-0.543
02-0.86-1.3280.756-0.721-1.215-1.215-1.3280.0540.140.1931.3030.56-1.022-0.9380.56-0.721
03-1.6-0.3020.083-1.6-0.439-0.658-1.114-0.3920.2690.4451.385-0.04-0.4390.0830.63-1.77
04-3.1260.112-3.1260.465-1.4540.219-4.40.881-1.0221.25-0.491.039-3.126-0.346-1.328-0.008
05-3.126-0.49-4.4-4.4-1.0221.805-3.126-2.584-3.126-0.181-3.126-4.4-2.2342.032-2.584-4.4
06-4.4-4.4-4.4-0.658-1.77-4.4-4.42.706-4.4-4.4-4.4-1.975-4.4-4.4-4.4-2.584
07-4.4-4.4-1.77-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-3.1262.747-3.126
08-4.4-4.4-4.4-4.4-4.4-4.4-4.4-3.126-3.1261.1452.3430.785-4.4-4.4-3.126-4.4
09-4.4-4.4-3.126-4.4-0.86-0.86-1.9750.7851.0391.1840.3611.082-2.584-0.721-0.7210.193
10-0.008-0.543-0.074-0.181-0.49-0.181-4.41.004-0.346-0.788-1.022-0.543-0.1810.404-0.5431.241
110.316-1.328-2.2340.3390.404-1.77-3.1260.504-0.108-1.215-2.584-0.490.5230.269-1.61.483
120.383-0.4390.881-0.074-1.975-0.144-2.584-0.04-3.126-1.77-1.975-2.5840.2930.7110.6131.05
13-4.4-0.108-2.2340.679-1.975-0.181-4.41.004-1.6-0.181-0.7881.093-1.4540.404-0.7210.957
14-1.975-1.6-1.77-2.5840.3390.14-0.439-0.144-1.328-0.599-1.77-2.584-0.1081.0161.752-0.144
15-4.4-4.4-1.9750.932-1.975-1.454-4.41.454-1.6-1.454-0.4391.735-3.126-2.234-3.1260.523
16-4.4-1.454-2.584-2.584-2.234-0.938-2.584-4.4-3.126-0.439-2.584-2.584-1.3282.502-0.346-0.008
17-1.215-3.126-3.126-3.1262.1190.269-0.5991.194-1.6-1.215-3.126-0.938-0.599-2.234-1.77-1.114
180.8810.921.1740.193-0.543-0.938-1.975-0.439-1.215-1.975-1.328-2.234-0.3460.0540.339-0.108