Model info
Transcription factorHbp1
ModelHBP1_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length9
Quality
D
Motif rank
0
ConsensusRnYSATTGA
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words5
TF familySOX-related factors{4.1.1}
TF subfamilyFurther Sox-related factors{4.1.1.9}
MGI894659
EntrezGene73389
UniProt IDHBP1_MOUSE
UniProt ACQ8R316
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.43115
0.0005 5.95843
0.0001 7.27444
GTEx tissue expression atlas Hbp1 expression
ReMap ChIP-seq dataset list Hbp1 datasets
Motifs in JASPAR
PCM
ACGT
012.9020.4021.2950.402
020.02.50.02.5
030.8931.6070.02.5
040.03.3040.8930.804
055.00.00.00.0
060.00.00.05.0
070.00.00.05.0
080.00.8044.1960.0
095.00.00.00.0
PWM
ACGT
010.693-0.720.027-0.72
02-1.4130.563-1.4130.563
03-0.2440.196-1.4130.563
04-1.4130.808-0.244-0.315
051.185-1.413-1.413-1.413
06-1.413-1.413-1.4131.185
07-1.413-1.413-1.4131.185
08-1.413-0.3151.024-1.413
091.185-1.413-1.413-1.413