Model info
Transcription factorHbp1
ModelHBP1_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length9
Quality
D
Motif rank
0
ConsensusRnYSATTGA
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words5
TF familySOX-related factors{4.1.1}
TF subfamilyFurther Sox-related factors{4.1.1.9}
MGI894659
EntrezGene73389
UniProt IDHBP1_MOUSE
UniProt ACQ8R316
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.43115
0.0005 5.95843
0.0001 7.27444
GTEx tissue expression atlas Hbp1 expression
Motifs in JASPAR
PCM
ACGT
012.9020.4021.2950.402
020.02.50.02.5
030.8931.6070.02.5
040.03.3040.8930.804
055.00.00.00.0
060.00.00.05.0
070.00.00.05.0
080.00.8044.1960.0
095.00.00.00.0
PWM
ACGT
010.693-0.720.027-0.72
02-1.4130.563-1.4130.563
03-0.2440.196-1.4130.563
04-1.4130.808-0.244-0.315
051.185-1.413-1.413-1.413
06-1.413-1.413-1.4131.185
07-1.413-1.413-1.4131.185
08-1.413-0.3151.024-1.413
091.185-1.413-1.413-1.413