Model info
Transcription factorHIC1
ModelHIC1_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length9
Quality
C
Motif rank
0
ConsensusdKGKTGCCM
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words40
TF familyFactors with multiple dispersed zinc fingers{2.3.4}
TF subfamilyHypermethylated in Cancer proteins{2.3.4.17}
HGNC4909
EntrezGene3090
UniProt IDHIC1_HUMAN
UniProt ACQ14526
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.60005
0.0005 5.36472
0.0001 7.27692
GTEx tissue expression atlas HIC1 expression
ReMap ChIP-seq dataset list HIC1 datasets
Motifs in JASPAR
PCM
ACGT
018.0014.12220.1787.031
020.973.87929.6344.849
030.00.036.4222.909
040.970.013.57824.784
050.00.00.039.332
060.970.038.3620.0
070.9738.3620.00.0
080.039.3320.00.0
097.51624.5423.6373.637
PWM
ACGT
01-0.187-0.7580.674-0.302
02-1.74-0.8071.044-0.623
03-2.461-2.4611.245-1.033
04-1.74-2.4610.2990.872
05-2.461-2.461-2.4611.32
06-1.74-2.4611.296-2.461
07-1.741.296-2.461-2.461
08-2.4611.32-2.461-2.461
09-0.2430.862-0.859-0.859