Model info
Transcription factorHic1
ModelHIC1_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length9
Quality
C
Motif rank
0
ConsensusdKGKTGCCM
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words40
TF familyFactors with multiple dispersed zinc fingers {2.3.4}
TF subfamilyHypermethylated in Cancer proteins {2.3.4.17}
MGIMGI:1338010
EntrezGeneGeneID:15248
(SSTAR profile)
UniProt IDHIC1_MOUSE
UniProt ACQ9R1Y5
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.55405
0.0005 5.330819999999999
0.0001 7.20006
GTEx tissue expression atlas Hic1 expression
Motifs in JASPAR
PCM
ACGT
018.0014.12220.1787.031
020.973.87929.6344.849
030.00.036.4222.909
040.970.013.57824.784
050.00.00.039.332
060.970.038.3620.0
070.9738.3620.00.0
080.039.3320.00.0
097.51624.5423.6373.637
PWM
ACGT
01-0.187-0.7580.674-0.302
02-1.74-0.8071.044-0.623
03-2.461-2.4611.245-1.033
04-1.74-2.4610.2990.872
05-2.461-2.461-2.4611.32
06-1.74-2.4611.296-2.461
07-1.741.296-2.461-2.461
08-2.4611.32-2.461-2.461
09-0.2430.862-0.859-0.859