Model info
Transcription factorHif1a
ModelHIF1A_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length8
Quality
C
Motif rank
0
ConsensusvdACGTGh
Best auROC (human)0.7620414498503719
Best auROC (mouse)0.7375160056506765
Peak sets in benchmark (human)39
Peak sets in benchmark (mouse)8
Aligned words501
TF familyPAS domain factors{1.2.5}
TF subfamilyAhr-like factors{1.2.5.1}
MGI106918
EntrezGene15251
UniProt IDHIF1A_MOUSE
UniProt ACQ61221
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.31019
0.0005 4.90321
0.0001 6.05981
GTEx tissue expression atlas Hif1a expression
ReMap ChIP-seq dataset list Hif1a datasets
Motifs in JASPAR
PCM
ACGT
01106.082.0264.048.0
02117.025.0209.0149.0
03413.06.078.03.0
0467.0401.05.027.0
0514.01.0485.00.0
064.04.00.0492.0
070.02.0497.01.0
08143.0261.043.053.0
PWM
ACGT
01-0.163-0.4150.741-0.938
02-0.065-1.5610.5090.174
031.187-2.819-0.464-3.325
04-0.6131.157-2.961-1.489
05-2.096-3.9031.347-4.4
06-3.126-3.126-4.41.361
07-4.4-3.5731.371-3.903
080.1330.73-1.044-0.841