Model info
Transcription factorHMX1
ModelHMX1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length17
Quality
D
Motif rank
0
ConsensusdYTAATTGnYnnWTWAK
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words34
TF familyNK-related factors{3.1.2}
TF subfamilyNK-5/HMX{3.1.2.18}
HGNC5017
EntrezGene3166
UniProt IDHMX1_HUMAN
UniProt ACQ9NP08
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.42371
0.0005 6.40321
0.0001 8.43531
GTEx tissue expression atlas HMX1 expression
ReMap ChIP-seq dataset list HMX1 datasets
Motifs in JASPAR
PCM
ACGT
016.754.7511.7510.75
024.256.252.2521.25
030.06.00.028.0
0434.00.00.00.0
0534.00.00.00.0
060.00.05.029.0
070.00.00.034.0
085.00.029.00.0
0910.011.02.011.0
102.04.02.026.0
117.07.02.018.0
125.06.06.017.0
134.03.01.026.0
143.250.250.2530.25
1525.50.53.54.5
1628.50.50.54.5
172.01.08.023.0
PWM
ACGT
01-0.206-0.510.2970.215
02-0.603-0.274-1.0970.858
03-2.365-0.31-2.3651.124
041.313-2.365-2.365-2.365
051.313-2.365-2.365-2.365
06-2.365-2.365-0.4671.158
07-2.365-2.365-2.3651.313
08-0.467-2.3651.158-2.365
090.1480.236-1.180.236
10-1.18-0.653-1.181.053
11-0.174-0.174-1.180.699
12-0.467-0.31-0.310.645
13-0.653-0.883-1.6071.053
14-0.82-2.115-2.1151.199
151.034-1.916-0.761-0.556
161.142-1.916-1.916-0.556
17-1.18-1.607-0.0550.934