Model info
Transcription factorHMX2
ModelHMX2_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusnWTAAKTGnbh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words1221
TF familyNK-related factors{3.1.2}
TF subfamilyNK-5/HMX{3.1.2.18}
HGNC5018
EntrezGene3167
UniProt IDHMX2_HUMAN
UniProt ACA2RU54
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.69505
0.0005 6.51523
0.0001 8.0883
GTEx tissue expression atlas HMX2 expression
ReMap ChIP-seq dataset list HMX2 datasets
Motifs in JASPAR
PCM
ACGT
01314.5196.5281.5428.5
02130.7587.7551.75950.75
0398.531.522.51068.5
041044.02.098.077.0
051215.00.05.01.0
06132.026.0378.0685.0
076.0211.08.0996.0
0838.515.51138.528.5
09216.5260.5431.5312.5
10160.25224.25167.25669.25
11244.25225.25189.25562.25
PWM
ACGT
010.03-0.437-0.0810.337
02-0.84-1.232-1.7471.132
03-1.119-2.222-2.5371.249
041.226-4.398-1.124-1.36
051.377-5.152-3.813-4.706
06-0.831-2.4030.2130.805
07-3.676-0.367-3.4471.179
08-2.031-2.8781.312-2.317
09-0.341-0.1580.3440.023
10-0.639-0.306-0.5970.782
11-0.221-0.302-0.4750.608