Model info
Transcription factorHMX3
ModelHMX3_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusnnYTAATTGbh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words38692
TF familyNK-related factors{3.1.2}
TF subfamilyNK-5/HMX{3.1.2.18}
HGNC5019
EntrezGene340784
UniProt IDHMX3_HUMAN
UniProt ACA6NHT5
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.97685
0.0005 6.14582
0.0001 8.40727
GTEx tissue expression atlas HMX3 expression
ReMap ChIP-seq dataset list HMX3 datasets
Motifs in JASPAR
PCM
ACGT
018778.511110.58262.510486.5
028657.258435.2512823.258722.25
032712.53475.52672.529777.5
04768.0580.0532.036758.0
0537025.2522.251456.25134.25
0638375.023.0215.025.0
0782.034.09445.029077.0
0898.252847.25316.2535376.25
09129.077.038332.0100.0
106656.2514956.2510149.256876.25
115071.08847.04452.020268.0
PWM
ACGT
01-0.0960.14-0.1560.082
02-0.11-0.1350.283-0.102
03-1.269-1.022-1.2841.126
04-2.529-2.808-2.8941.336
051.343-5.961-1.891-4.257
061.379-5.932-3.793-5.857
07-4.738-5.575-0.0221.102
08-4.562-1.221-3.4111.298
09-4.296-4.7981.378-4.545
10-0.3720.4370.049-0.34
11-0.644-0.088-0.7740.741