Model info
Transcription factorHNF1A
ModelHNF1A_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
C
Motif rank
0
ConsensusdRKWAATGWTTWRYh
Best auROC (human)0.926739666836407
Best auROC (mouse)
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)
Aligned words500
TF familyPOU domain factors{3.1.10}
TF subfamilyHNF1-like factors{3.1.10.7}
HGNC11621
EntrezGene6927
UniProt IDHNF1A_HUMAN
UniProt ACP20823
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.27931
0.0005 6.18801
0.0001 8.05761
PCM
ACGT
01160.023.0200.0117.0
0273.017.0360.050.0
0323.033.057.0387.0
0464.051.045.0340.0
05457.02.024.017.0
06396.069.09.026.0
07105.05.014.0376.0
080.00.0293.0207.0
09363.05.024.0108.0
1040.012.032.0416.0
1112.033.06.0449.0
12362.020.036.082.0
13387.040.041.032.0
1454.0361.018.067.0
15108.0170.016.0206.0
PWM
ACGT
010.244-1.640.465-0.065
02-0.529-1.921.05-0.898
03-1.64-1.298-0.7711.122
04-0.658-0.879-1.00.993
051.287-3.573-1.6-1.92
061.145-0.584-2.484-1.525
07-0.172-2.961-2.0961.093
08-4.4-4.40.8450.5
091.058-2.961-1.6-0.144
10-1.114-2.234-1.3281.194
11-2.234-1.298-2.8191.27
121.055-1.77-1.215-0.415
131.122-1.114-1.09-1.328
14-0.8231.053-1.868-0.613
15-0.1440.304-1.9750.495