Model info
Transcription factorHnf1a
ModelHNF1A_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length15
Quality
A
Motif rank
0
ConsensusRGTTAWTvWTYdhYv
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words175
TF familyPOU domain factors{3.1.10}
TF subfamilyHNF1-like factors{3.1.10.7}
MGI98504
EntrezGene21405
UniProt IDHNF1A_MOUSE
UniProt ACP22361
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.07401
0.0005 5.97461
0.0001 7.83001
GTEx tissue expression atlas Hnf1a expression
ReMap ChIP-seq dataset list Hnf1a datasets
Motifs in JASPAR
PCM
ACGT
0160.2885.19384.08724.432
0216.4451.292151.0935.17
031.215.4292.031155.339
0416.1682.6770.0155.155
05169.6612.9540.6460.739
06130.16818.2116.01319.608
0715.7061.5691.477155.247
0869.77639.04134.42530.757
0997.4294.33910.07562.158
1011.093.977.293151.647
1111.18330.1452.031130.642
1296.63210.44433.45633.468
1386.73949.25713.7824.224
1432.8899.0784.89337.149
1562.12564.15625.75821.961
PWM
ACGT
010.318-1.9330.645-0.555
02-0.926-2.8531.224-1.936
03-2.89-0.985-2.6021.252
04-0.942-2.424-3.5481.251
051.339-2.356-3.141-3.095
061.077-0.832-1.814-0.762
07-0.969-2.751-2.7841.251
080.462-0.105-0.226-0.335
090.79-2.074-1.3710.348
10-1.286-2.142-1.6521.228
11-1.278-0.354-2.6021.08
120.782-1.339-0.254-0.254
130.6760.121-1.089-0.563
14-0.2710.807-1.98-0.153
150.3480.379-0.504-0.656