Model info
Transcription factorHnf1b
ModelHNF1B_MOUSE.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
1
ConsensushhdGTTAATvWTT
Best auROC (human)0.9145372989907139
Best auROC (mouse)0.9916796794824011
Peak sets in benchmark (human)5
Peak sets in benchmark (mouse)8
Aligned words500
TF familyPOU domain factors{3.1.10}
TF subfamilyHNF1-like factors{3.1.10.7}
MGI98505
EntrezGene21410
UniProt IDHNF1B_MOUSE
UniProt ACP27889
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.94876
0.0005 5.92531
0.0001 8.010394999999999
GTEx tissue expression atlas Hnf1b expression
Motifs in JASPAR
PCM
ACGT
01105.0164.061.0170.0
02119.079.068.0234.0
03218.012.0179.091.0
0431.02.0452.015.0
055.016.08.0471.0
0639.015.09.0437.0
07486.04.09.01.0
08433.036.011.020.0
0932.03.03.0462.0
10103.0111.0210.076.0
11364.011.015.0110.0
1230.010.060.0400.0
131.032.01.0466.0
PWM
ACGT
01-0.1720.269-0.7050.304
02-0.049-0.452-0.5990.621
030.551-2.2340.355-0.313
04-1.358-3.5731.276-2.034
05-2.961-1.975-2.5841.317
06-1.138-2.034-2.4841.243
071.349-3.126-2.484-3.903
081.234-1.215-2.311-1.77
09-1.328-3.325-3.3251.298
10-0.191-0.1170.514-0.49
111.061-2.311-2.034-0.126
12-1.389-2.394-0.7211.155
13-3.903-1.328-3.9031.307